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apex: phylogenetics with multiple genes.
Jombart T, Archer F, Schliep K, Kamvar Z, Harris R, Paradis E, Goudet J, Lapp H. Jombart T, et al. Mol Ecol Resour. 2017 Jan;17(1):19-26. doi: 10.1111/1755-0998.12567. Epub 2016 Aug 12. Mol Ecol Resour. 2017. PMID: 27417145 Free PMC article.
phangorn: phylogenetic analysis in R.
Schliep KP. Schliep KP. Bioinformatics. 2011 Feb 15;27(4):592-3. doi: 10.1093/bioinformatics/btq706. Epub 2010 Dec 17. Bioinformatics. 2011. PMID: 21169378 Free PMC article.
Linking genomics and population genetics with R.
Paradis E, Gosselin T, Goudet J, Jombart T, Schliep K. Paradis E, et al. Mol Ecol Resour. 2017 Jan;17(1):54-66. doi: 10.1111/1755-0998.12577. Epub 2016 Aug 29. Mol Ecol Resour. 2017. PMID: 27461508
Harvesting evolutionary signals in a forest of prokaryotic gene trees.
Schliep K, Lopez P, Lapointe FJ, Bapteste E. Schliep K, et al. Mol Biol Evol. 2011 Apr;28(4):1393-405. doi: 10.1093/molbev/msq323. Epub 2010 Dec 20. Mol Biol Evol. 2011. PMID: 21172835
Of woods and webs: possible alternatives to the tree of life for studying genomic fluidity in E. coli.
Beauregard-Racine J, Bicep C, Schliep K, Lopez P, Lapointe FJ, Bapteste E. Beauregard-Racine J, et al. Biol Direct. 2011 Jul 20;6:39; discussion 39. doi: 10.1186/1745-6150-6-39. Biol Direct. 2011. PMID: 21774799 Free PMC article.
Life history linked to immune investment in developing amphibians.
Woodhams DC, Bell SC, Bigler L, Caprioli RM, Chaurand P, Lam BA, Reinert LK, Stalder U, Vazquez VM, Schliep K, Hertz A, Rollins-Smith LA. Woodhams DC, et al. Conserv Physiol. 2016 Aug 26;4(1):cow025. doi: 10.1093/conphys/cow025. eCollection 2016. Conserv Physiol. 2016. PMID: 27928507 Free PMC article.
Comparison of the Serum Tumor Markers S100 and Melanoma-inhibitory Activity (MIA) in the Monitoring of Patients with Metastatic Melanoma Receiving Vaccination Immunotherapy with Dendritic Cells.
Uslu U, Schliep S, Schliep K, Erdmann M, Koch HU, Parsch H, Rosenheinrich S, Anzengruber D, Bosserhoff AK, Schuler G, Schuler-Thurner B. Uslu U, et al. Anticancer Res. 2017 Sep;37(9):5033-5037. doi: 10.21873/anticanres.11918. Anticancer Res. 2017. PMID: 28870930
The association between preconception body mass index and subfertility among Hispanic and non-Hispanic women: A cross-sectional study from Utah's Pregnancy Risk Assessment Monitoring System survey (2012-2015).
Hu Q, Lee J, Nelson J, Harris M, Ess RH, Rogers CR, Sanders J, VanDerslice J, Stanford JB, Schliep KC. Hu Q, et al. Among authors: schliep kc. Utah Womens Health Rev. 2020;2020:https://uwhr.utah.edu/2020/07/. Epub 2020 Jul 31. Utah Womens Health Rev. 2020. PMID: 32914149 Free PMC article.
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