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New World cattle show ancestry from multiple independent domestication events.
McTavish EJ, Decker JE, Schnabel RD, Taylor JF, Hillis DM. McTavish EJ, et al. Among authors: Schnabel RD. Proc Natl Acad Sci U S A. 2013 Apr 9;110(15):E1398-406. doi: 10.1073/pnas.1303367110. Epub 2013 Mar 25. Proc Natl Acad Sci U S A. 2013. PMID: 23530234 Free PMC article.
An assessment of population structure in eight breeds of cattle using a whole genome SNP panel.
McKay SD, Schnabel RD, Murdoch BM, Matukumalli LK, Aerts J, Coppieters W, Crews D, Dias Neto E, Gill CA, Gao C, Mannen H, Wang Z, Van Tassell CP, Williams JL, Taylor JF, Moore SS. McKay SD, et al. Among authors: Schnabel RD. BMC Genet. 2008 May 20;9:37. doi: 10.1186/1471-2156-9-37. BMC Genet. 2008. PMID: 18492244 Free PMC article.
Genome-wide survey of SNP variation uncovers the genetic structure of cattle breeds.
Bovine HapMap Consortium, Gibbs RA, Taylor JF, Van Tassell CP, Barendse W, Eversole KA, Gill CA, Green RD, Hamernik DL, Kappes SM, Lien S, Matukumalli LK, McEwan JC, Nazareth LV, Schnabel RD, Weinstock GM, Wheeler DA, Ajmone-Marsan P, Boettcher PJ, Caetano AR, Garcia JF, Hanotte O, Mariani P, Skow LC, Sonstegard TS, Williams JL, Diallo B, Hailemariam L, Martinez ML, Morris CA, Silva LO, Spelman RJ, Mulatu W, Zhao K, Abbey CA, Agaba M, Araujo FR, Bunch RJ, Burton J, Gorni C, Olivier H, Harrison BE, Luff B, Machado MA, Mwakaya J, Plastow G, Sim W, Smith T, Thomas MB, Valentini A, Williams P, Womack J, Woolliams JA, Liu Y, Qin X, Worley KC, Gao C, Jiang H, Moore SS, Ren Y, Song XZ, Bustamante CD, Hernandez RD, Muzny DM, Patil S, San Lucas A, Fu Q, Kent MP, Vega R, Matukumalli A, McWilliam S, Sclep G, Bryc K, Choi J, Gao H, Grefenstette JJ, Murdoch B, Stella A, Villa-Angulo R, Wright M, Aerts J, Jann O, Negrini R, Goddard ME, Hayes BJ, Bradley DG, Barbosa da Silva M, Lau LP, Liu GE, Lynn DJ, Panzitta F, Dodds KG. Bovine HapMap Consortium, et al. Among authors: Schnabel RD. Science. 2009 Apr 24;324(5926):528-32. doi: 10.1126/science.1167936. Science. 2009. PMID: 19390050 Free PMC article.
Resolving the evolution of extant and extinct ruminants with high-throughput phylogenomics.
Decker JE, Pires JC, Conant GC, McKay SD, Heaton MP, Chen K, Cooper A, Vilkki J, Seabury CM, Caetano AR, Johnson GS, Brenneman RA, Hanotte O, Eggert LS, Wiener P, Kim JJ, Kim KS, Sonstegard TS, Van Tassell CP, Neibergs HL, McEwan JC, Brauning R, Coutinho LL, Babar ME, Wilson GA, McClure MC, Rolf MM, Kim J, Schnabel RD, Taylor JF. Decker JE, et al. Among authors: Schnabel RD. Version 2. Proc Natl Acad Sci U S A. 2009 Nov 3;106(44):18644-9. doi: 10.1073/pnas.0904691106. Epub 2009 Oct 21. Proc Natl Acad Sci U S A. 2009. PMID: 19846765 Free PMC article.
Evolution of the bovine TLR gene family and member associations with Mycobacterium avium subspecies paratuberculosis infection.
Fisher CA, Bhattarai EK, Osterstock JB, Dowd SE, Seabury PM, Vikram M, Whitlock RH, Schukken YH, Schnabel RD, Taylor JF, Womack JE, Seabury CM. Fisher CA, et al. Among authors: Schnabel RD. PLoS One. 2011;6(11):e27744. doi: 10.1371/journal.pone.0027744. Epub 2011 Nov 30. PLoS One. 2011. PMID: 22164200 Free PMC article.
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