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The Protein Data Bank.
Berman HM, Battistuz T, Bhat TN, Bluhm WF, Bourne PE, Burkhardt K, Feng Z, Gilliland GL, Iype L, Jain S, Fagan P, Marvin J, Padilla D, Ravichandran V, Schneider B, Thanki N, Weissig H, Westbrook JD, Zardecki C. Berman HM, et al. Among authors: schneider b. Acta Crystallogr D Biol Crystallogr. 2002 Jun;58(Pt 6 No 1):899-907. doi: 10.1107/s0907444902003451. Epub 2002 May 29. Acta Crystallogr D Biol Crystallogr. 2002. PMID: 12037327 Free article.
The Nucleic Acid Database.
Berman HM, Westbrook J, Feng Z, Iype L, Schneider B, Zardecki C. Berman HM, et al. Among authors: schneider b. Acta Crystallogr D Biol Crystallogr. 2002 Jun;58(Pt 6 No 1):889-98. doi: 10.1107/s0907444902003487. Epub 2002 May 29. Acta Crystallogr D Biol Crystallogr. 2002. PMID: 12037326
Bioinformatic analysis of the protein/DNA interface.
Schneider B, Cerný J, Svozil D, Cech P, Gelly JC, de Brevern AG. Schneider B, et al. Nucleic Acids Res. 2014 Mar;42(5):3381-94. doi: 10.1093/nar/gkt1273. Epub 2013 Dec 11. Nucleic Acids Res. 2014. PMID: 24335080 Free PMC article.
., 41:271-287)] and dinucleotide conformers [Svozil, Kalina, Omelka and Schneider (2008) (DNA conformations and their sequence preferences. ...The generally known induction of A-DNA forms by complexation was more accurately attributed to A-like and intermediate A/B
., 41:271-287)] and dinucleotide conformers [Svozil, Kalina, Omelka and Schneider (2008) (DNA conformations and their sequence prefer …
A community proposal to integrate structural bioinformatics activities in ELIXIR (3D-Bioinfo Community).
Orengo C, Velankar S, Wodak S, Zoete V, Bonvin AMJJ, Elofsson A, Feenstra KA, Gerloff DL, Hamelryck T, Hancock JM, Helmer-Citterich M, Hospital A, Orozco M, Perrakis A, Rarey M, Soares C, Sussman JL, Thornton JM, Tuffery P, Tusnady G, Wierenga R, Salminen T, Schneider B. Orengo C, et al. Among authors: schneider b. F1000Res. 2020 Apr 22;9:ELIXIR-278. doi: 10.12688/f1000research.20559.1. eCollection 2020. F1000Res. 2020. PMID: 32566135 Free PMC article.
RNA backbone: consensus all-angle conformers and modular string nomenclature (an RNA Ontology Consortium contribution).
Richardson JS, Schneider B, Murray LW, Kapral GJ, Immormino RM, Headd JJ, Richardson DC, Ham D, Hershkovits E, Williams LD, Keating KS, Pyle AM, Micallef D, Westbrook J, Berman HM; RNA Ontology Consortium. Richardson JS, et al. Among authors: schneider b. RNA. 2008 Mar;14(3):465-81. doi: 10.1261/rna.657708. Epub 2008 Jan 11. RNA. 2008. PMID: 18192612 Free PMC article.
Local dynamics of proteins and DNA evaluated from crystallographic B factors.
Schneider B, Gelly JC, de Brevern AG, Černý J. Schneider B, et al. Acta Crystallogr D Biol Crystallogr. 2014 Sep;70(Pt 9):2413-9. doi: 10.1107/S1399004714014631. Epub 2014 Aug 29. Acta Crystallogr D Biol Crystallogr. 2014. PMID: 25195754 Free PMC article.
The local molecular dynamics concealed in diffraction images is expressed as so-called B factors. To find out how the crystal-derived B factors represent the dynamic behaviour of atoms and residues of proteins and DNA in their complexes, the distributions of scaled …
The local molecular dynamics concealed in diffraction images is expressed as so-called B factors. To find out how the crystal-derived …
3,261 results