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Capture Hi-C identifies the chromatin interactome of colorectal cancer risk loci.
Jäger R, Migliorini G, Henrion M, Kandaswamy R, Speedy HE, Heindl A, Whiffin N, Carnicer MJ, Broome L, Dryden N, Nagano T, Schoenfelder S, Enge M, Yuan Y, Taipale J, Fraser P, Fletcher O, Houlston RS. Jäger R, et al. Among authors: schoenfelder s. Nat Commun. 2015 Feb 19;6:6178. doi: 10.1038/ncomms7178. Nat Commun. 2015. PMID: 25695508 Free PMC article.
The transcriptional interactome: gene expression in 3D.
Schoenfelder S, Clay I, Fraser P. Schoenfelder S, et al. Curr Opin Genet Dev. 2010 Apr;20(2):127-33. doi: 10.1016/j.gde.2010.02.002. Epub 2010 Mar 6. Curr Opin Genet Dev. 2010. PMID: 20211559 Review.
Transcription factories and nuclear organization of the genome.
Eskiw CH, Cope NF, Clay I, Schoenfelder S, Nagano T, Fraser P. Eskiw CH, et al. Among authors: schoenfelder s. Cold Spring Harb Symp Quant Biol. 2010;75:501-6. doi: 10.1101/sqb.2010.75.046. Epub 2011 Apr 5. Cold Spring Harb Symp Quant Biol. 2010. PMID: 21467135
Nuclear RNA sequencing of the mouse erythroid cell transcriptome.
Mitchell JA, Clay I, Umlauf D, Chen CY, Moir CA, Eskiw CH, Schoenfelder S, Chakalova L, Nagano T, Fraser P. Mitchell JA, et al. Among authors: schoenfelder s. PLoS One. 2012;7(11):e49274. doi: 10.1371/journal.pone.0049274. Epub 2012 Nov 29. PLoS One. 2012. PMID: 23209567 Free PMC article.
Single-cell Hi-C reveals cell-to-cell variability in chromosome structure.
Nagano T, Lubling Y, Stevens TJ, Schoenfelder S, Yaffe E, Dean W, Laue ED, Tanay A, Fraser P. Nagano T, et al. Among authors: schoenfelder s. Nature. 2013 Oct 3;502(7469):59-64. doi: 10.1038/nature12593. Epub 2013 Sep 25. Nature. 2013. PMID: 24067610 Free PMC article.
Unbiased analysis of potential targets of breast cancer susceptibility loci by Capture Hi-C.
Dryden NH, Broome LR, Dudbridge F, Johnson N, Orr N, Schoenfelder S, Nagano T, Andrews S, Wingett S, Kozarewa I, Assiotis I, Fenwick K, Maguire SL, Campbell J, Natrajan R, Lambros M, Perrakis E, Ashworth A, Fraser P, Fletcher O. Dryden NH, et al. Among authors: schoenfelder s. Genome Res. 2014 Nov;24(11):1854-68. doi: 10.1101/gr.175034.114. Epub 2014 Aug 13. Genome Res. 2014. PMID: 25122612 Free PMC article.
Global reorganization of the nuclear landscape in senescent cells.
Chandra T, Ewels PA, Schoenfelder S, Furlan-Magaril M, Wingett SW, Kirschner K, Thuret JY, Andrews S, Fraser P, Reik W. Chandra T, et al. Among authors: schoenfelder s. Cell Rep. 2015 Feb 3;10(4):471-83. doi: 10.1016/j.celrep.2014.12.055. Epub 2015 Jan 29. Cell Rep. 2015. PMID: 25640177 Free PMC article.
The pluripotent regulatory circuitry connecting promoters to their long-range interacting elements.
Schoenfelder S, Furlan-Magaril M, Mifsud B, Tavares-Cadete F, Sugar R, Javierre BM, Nagano T, Katsman Y, Sakthidevi M, Wingett SW, Dimitrova E, Dimond A, Edelman LB, Elderkin S, Tabbada K, Darbo E, Andrews S, Herman B, Higgs A, LeProust E, Osborne CS, Mitchell JA, Luscombe NM, Fraser P. Schoenfelder S, et al. Genome Res. 2015 Apr;25(4):582-97. doi: 10.1101/gr.185272.114. Epub 2015 Mar 9. Genome Res. 2015. PMID: 25752748 Free PMC article.
60 results