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Combinatorial patterns of histone acetylations and methylations in the human genome.
Wang Z, Zang C, Rosenfeld JA, Schones DE, Barski A, Cuddapah S, Cui K, Roh TY, Peng W, Zhang MQ, Zhao K. Wang Z, et al. Among authors: schones de. Nat Genet. 2008 Jul;40(7):897-903. doi: 10.1038/ng.154. Epub 2008 Jun 15. Nat Genet. 2008. PMID: 18552846 Free PMC article.
Genomic profiling of HMGN1 reveals an association with chromatin at regulatory regions.
Cuddapah S, Schones DE, Cui K, Roh TY, Barski A, Wei G, Rochman M, Bustin M, Zhao K. Cuddapah S, et al. Among authors: schones de. Mol Cell Biol. 2011 Feb;31(4):700-9. doi: 10.1128/MCB.00740-10. Epub 2010 Dec 20. Mol Cell Biol. 2011. PMID: 21173166 Free PMC article.
Regulation of nucleosome landscape and transcription factor targeting at tissue-specific enhancers by BRG1.
Hu G, Schones DE, Cui K, Ybarra R, Northrup D, Tang Q, Gattinoni L, Restifo NP, Huang S, Zhao K. Hu G, et al. Among authors: schones de. Genome Res. 2011 Oct;21(10):1650-8. doi: 10.1101/gr.121145.111. Epub 2011 Jul 27. Genome Res. 2011. PMID: 21795385 Free PMC article.
Chromatin poises miRNA- and protein-coding genes for expression.
Barski A, Jothi R, Cuddapah S, Cui K, Roh TY, Schones DE, Zhao K. Barski A, et al. Among authors: schones de. Genome Res. 2009 Oct;19(10):1742-51. doi: 10.1101/gr.090951.109. Epub 2009 Aug 27. Genome Res. 2009. PMID: 19713549 Free PMC article.
Genome-wide mapping of HATs and HDACs reveals distinct functions in active and inactive genes.
Wang Z, Zang C, Cui K, Schones DE, Barski A, Peng W, Zhao K. Wang Z, et al. Among authors: schones de. Cell. 2009 Sep 4;138(5):1019-31. doi: 10.1016/j.cell.2009.06.049. Epub 2009 Aug 20. Cell. 2009. PMID: 19698979 Free PMC article.
Characterization of human epigenomes.
Wang Z, Schones DE, Zhao K. Wang Z, et al. Among authors: schones de. Curr Opin Genet Dev. 2009 Apr;19(2):127-34. doi: 10.1016/j.gde.2009.02.001. Epub 2009 Mar 18. Curr Opin Genet Dev. 2009. PMID: 19299119 Free PMC article. Review.
Down-regulation of Gfi-1 expression by TGF-beta is important for differentiation of Th17 and CD103+ inducible regulatory T cells.
Zhu J, Davidson TS, Wei G, Jankovic D, Cui K, Schones DE, Guo L, Zhao K, Shevach EM, Paul WE. Zhu J, et al. Among authors: schones de. J Exp Med. 2009 Feb 16;206(2):329-41. doi: 10.1084/jem.20081666. Epub 2009 Feb 2. J Exp Med. 2009. PMID: 19188499 Free PMC article.
Global mapping of H3K4me3 and H3K27me3 reveals specificity and plasticity in lineage fate determination of differentiating CD4+ T cells.
Wei G, Wei L, Zhu J, Zang C, Hu-Li J, Yao Z, Cui K, Kanno Y, Roh TY, Watford WT, Schones DE, Peng W, Sun HW, Paul WE, O'Shea JJ, Zhao K. Wei G, et al. Among authors: schones de. Immunity. 2009 Jan 16;30(1):155-67. doi: 10.1016/j.immuni.2008.12.009. Immunity. 2009. PMID: 19144320 Free PMC article.
Chromatin signatures in multipotent human hematopoietic stem cells indicate the fate of bivalent genes during differentiation.
Cui K, Zang C, Roh TY, Schones DE, Childs RW, Peng W, Zhao K. Cui K, et al. Among authors: schones de. Cell Stem Cell. 2009 Jan 9;4(1):80-93. doi: 10.1016/j.stem.2008.11.011. Cell Stem Cell. 2009. PMID: 19128795 Free PMC article.
Global analysis of the insulator binding protein CTCF in chromatin barrier regions reveals demarcation of active and repressive domains.
Cuddapah S, Jothi R, Schones DE, Roh TY, Cui K, Zhao K. Cuddapah S, et al. Among authors: schones de. Genome Res. 2009 Jan;19(1):24-32. doi: 10.1101/gr.082800.108. Epub 2008 Dec 3. Genome Res. 2009. PMID: 19056695 Free PMC article.
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