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Genomic characterization of Burkholderia pseudomallei isolates selected for medical countermeasures testing: comparative genomics associated with differential virulence.
Sahl JW, Allender CJ, Colman RE, Califf KJ, Schupp JM, Currie BJ, Van Zandt KE, Gelhaus HC, Keim P, Tuanyok A. Sahl JW, et al. Among authors: schupp jm. PLoS One. 2015 Mar 24;10(3):e0121052. doi: 10.1371/journal.pone.0121052. eCollection 2015. PLoS One. 2015. PMID: 25803742 Free PMC article.
Using Whole Genome Analysis to Examine Recombination across Diverse Sequence Types of Staphylococcus aureus.
Driebe EM, Sahl JW, Roe C, Bowers JR, Schupp JM, Gillece JD, Kelley E, Price LB, Pearson TR, Hepp CM, Brzoska PM, Cummings CA, Furtado MR, Andersen PS, Stegger M, Engelthaler DM, Keim PS. Driebe EM, et al. Among authors: schupp jm. PLoS One. 2015 Jul 10;10(7):e0130955. doi: 10.1371/journal.pone.0130955. eCollection 2015. PLoS One. 2015. PMID: 26161978 Free PMC article.
Staphylococcus aureus CC398: host adaptation and emergence of methicillin resistance in livestock.
Price LB, Stegger M, Hasman H, Aziz M, Larsen J, Andersen PS, Pearson T, Waters AE, Foster JT, Schupp J, Gillece J, Driebe E, Liu CM, Springer B, Zdovc I, Battisti A, Franco A, Zmudzki J, Schwarz S, Butaye P, Jouy E, Pomba C, Porrero MC, Ruimy R, Smith TC, Robinson DA, Weese JS, Arriola CS, Yu F, Laurent F, Keim P, Skov R, Aarestrup FM. Price LB, et al. mBio. 2012 Feb 21;3(1):e00305-11. doi: 10.1128/mBio.00305-11. Print 2012. mBio. 2012. PMID: 22354957 Free PMC article.
Expanding the Burkholderia pseudomallei Complex with the Addition of Two Novel Species: Burkholderia mayonis sp. nov. and Burkholderia savannae sp. nov.
Hall CM, Baker AL, Sahl JW, Mayo M, Scholz HC, Kaestli M, Schupp J, Martz M, Settles EW, Busch JD, Sidak-Loftis L, Thomas A, Kreutzer L, Georgi E, Schweizer HP, Warner JM, Keim P, Currie BJ, Wagner DM. Hall CM, et al. Among authors: schupp j. Appl Environ Microbiol. 2022 Jan 11;88(1):e0158321. doi: 10.1128/AEM.01583-21. Epub 2021 Oct 13. Appl Environ Microbiol. 2022. PMID: 34644162 Free PMC article.
When outgroups fail; phylogenomics of rooting the emerging pathogen, Coxiella burnetii.
Pearson T, Hornstra HM, Sahl JW, Schaack S, Schupp JM, Beckstrom-Sternberg SM, O'Neill MW, Priestley RA, Champion MD, Beckstrom-Sternberg JS, Kersh GJ, Samuel JE, Massung RF, Keim P. Pearson T, et al. Among authors: schupp jm. Syst Biol. 2013 Sep;62(5):752-62. doi: 10.1093/sysbio/syt038. Epub 2013 Jun 4. Syst Biol. 2013. PMID: 23736103 Free PMC article.
Real-time PCR assays for genotyping of Cryptococcus gattii in North America.
Kelley EJ, Driebe EM, Etienne K, Brandt ME, Schupp JM, Gillece JD, Trujillo JS, Lockhart SR, Deak E, Keim PS, Engelthaler DM. Kelley EJ, et al. Among authors: schupp jm. BMC Microbiol. 2014 May 13;14:125. doi: 10.1186/1471-2180-14-125. BMC Microbiol. 2014. PMID: 24886039 Free PMC article.
81 results