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SemGen: a tool for semantics-based annotation and composition of biosimulation models.
Neal ML, Thompson CT, Kim KG, James RC, Cook DL, Carlson BE, Gennari JH. Neal ML, et al. Bioinformatics. 2019 May 1;35(9):1600-1602. doi: 10.1093/bioinformatics/bty829. Bioinformatics. 2019. PMID: 30256901 Free PMC article.
SemGen is a tool for semantics-based annotation and composition of biosimulation models designed to address this demand. ...SemGen leverages annotations to expose a model's biological and computat
SemGen is a tool for semantics-based annotation and composition of biosimulation models
Multiple ontologies in action: composite annotations for biosimulation models.
Gennari JH, Neal ML, Galdzicki M, Cook DL. Gennari JH, et al. J Biomed Inform. 2011 Feb;44(1):146-54. doi: 10.1016/j.jbi.2010.06.007. Epub 2010 Jun 30. J Biomed Inform. 2011. PMID: 20601121 Free PMC article.
These composite annotations provide the semantic expressivity needed to disambiguate the often-complex features of biosimulation models, and can be used to assist with model merging and interoperability. In this paper, we demonstrate the utility …
These composite annotations provide the semantic expressivity needed to disambiguate the often-complex features of biosimul