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Genome-wide DNA methylation differences in nucleus accumbens of smokers vs. nonsmokers.
Markunas CA, Semick SA, Quach BC, Tao R, Deep-Soboslay A, Carnes MU, Bierut LJ, Hyde TM, Kleinman JE, Johnson EO, Jaffe AE, Hancock DB. Markunas CA, et al. Among authors: semick sa. Neuropsychopharmacology. 2021 Feb;46(3):554-560. doi: 10.1038/s41386-020-0782-0. Epub 2020 Jul 30. Neuropsychopharmacology. 2021. PMID: 32731254 Free PMC article.
Dissecting transcriptomic signatures of neuronal differentiation and maturation using iPSCs.
Burke EE, Chenoweth JG, Shin JH, Collado-Torres L, Kim SK, Micali N, Wang Y, Colantuoni C, Straub RE, Hoeppner DJ, Chen HY, Sellers A, Shibbani K, Hamersky GR, Diaz Bustamante M, Phan BN, Ulrich WS, Valencia C, Jaishankar A, Price AJ, Rajpurohit A, Semick SA, Bürli RW, Barrow JC, Hiler DJ, Page SC, Martinowich K, Hyde TM, Kleinman JE, Berman KF, Apud JA, Cross AJ, Brandon NJ, Weinberger DR, Maher BJ, McKay RDG, Jaffe AE. Burke EE, et al. Among authors: semick sa. Nat Commun. 2020 Jan 23;11(1):462. doi: 10.1038/s41467-019-14266-z. Nat Commun. 2020. PMID: 31974374 Free PMC article.
Regional Heterogeneity in Gene Expression, Regulation, and Coherence in the Frontal Cortex and Hippocampus across Development and Schizophrenia.
Collado-Torres L, Burke EE, Peterson A, Shin J, Straub RE, Rajpurohit A, Semick SA, Ulrich WS; BrainSeq Consortium; Price AJ, Valencia C, Tao R, Deep-Soboslay A, Hyde TM, Kleinman JE, Weinberger DR, Jaffe AE. Collado-Torres L, et al. Among authors: semick sa. Neuron. 2019 Jul 17;103(2):203-216.e8. doi: 10.1016/j.neuron.2019.05.013. Epub 2019 Jun 4. Neuron. 2019. PMID: 31174959 Free PMC article.
SeqAcademy: an educational pipeline for RNA-Seq and ChIP-Seq analysis.
Ather SH, Awe OI, Butler TJ, Denka T, Semick SA, Tang W, Busby B. Ather SH, et al. Among authors: semick sa. F1000Res. 2018 May 22;7:ISCB Comm J-628. doi: 10.12688/f1000research.14880.4. eCollection 2018. F1000Res. 2018. PMID: 33014338 Free PMC article.