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Cell Type-Specific Methylome-wide Association Studies Implicate Neurotrophin and Innate Immune Signaling in Major Depressive Disorder.
Chan RF, Turecki G, Shabalin AA, Guintivano J, Zhao M, Xie LY, van Grootheest G, Kaminsky ZA, Dean B, Penninx BWJH, Aberg KA, van den Oord EJCG. Chan RF, et al. Among authors: shabalin aa. Biol Psychiatry. 2020 Mar 1;87(5):431-442. doi: 10.1016/j.biopsych.2019.10.014. Epub 2019 Nov 1. Biol Psychiatry. 2020. PMID: 31889537 Free PMC article.
Heritability and genomics of gene expression in peripheral blood.
Wright FA, Sullivan PF, Brooks AI, Zou F, Sun W, Xia K, Madar V, Jansen R, Chung W, Zhou YH, Abdellaoui A, Batista S, Butler C, Chen G, Chen TH, D'Ambrosio D, Gallins P, Ha MJ, Hottenga JJ, Huang S, Kattenberg M, Kochar J, Middeldorp CM, Qu A, Shabalin A, Tischfield J, Todd L, Tzeng JY, van Grootheest G, Vink JM, Wang Q, Wang W, Wang W, Willemsen G, Smit JH, de Geus EJ, Yin Z, Penninx BW, Boomsma DI. Wright FA, et al. Nat Genet. 2014 May;46(5):430-7. doi: 10.1038/ng.2951. Epub 2014 Apr 13. Nat Genet. 2014. PMID: 24728292 Free PMC article.
Refinement of schizophrenia GWAS loci using methylome-wide association data.
Kumar G, Clark SL, McClay JL, Shabalin AA, Adkins DE, Xie L, Chan R, Nerella S, Kim Y, Sullivan PF, Hultman CM, Magnusson PK, Aberg KA, van den Oord EJ. Kumar G, et al. Among authors: shabalin aa. Hum Genet. 2015 Jan;134(1):77-87. doi: 10.1007/s00439-014-1494-5. Epub 2014 Oct 7. Hum Genet. 2015. PMID: 25284466 Free PMC article.
Combined Whole Methylome and Genomewide Association Study Implicates CNTN4 in Alcohol Use.
Clark SL, Aberg KA, Nerella S, Kumar G, McClay JL, Chen W, Xie LY, Harada A, Shabalin AA, Gao G, Bergen SE, Hultman CM, Magnusson PK, Sullivan PF, van den Oord EJ. Clark SL, et al. Among authors: shabalin aa. Alcohol Clin Exp Res. 2015 Aug;39(8):1396-405. doi: 10.1111/acer.12790. Epub 2015 Jul 4. Alcohol Clin Exp Res. 2015. PMID: 26146898 Free PMC article.
Deep Sequencing of Three Loci Implicated in Large-Scale Genome-Wide Association Study Smoking Meta-Analyses.
Clark SL, McClay JL, Adkins DE, Aberg KA, Kumar G, Nerella S, Xie L, Collins AL, Crowley JJ, Quakenbush CR, Hillard CE, Gao G, Shabalin AA, Peterson RE, Copeland WE, Silberg JL, Maes H, Sullivan PF, Costello EJ, van den Oord EJ. Clark SL, et al. Among authors: shabalin aa. Nicotine Tob Res. 2016 May;18(5):626-31. doi: 10.1093/ntr/ntv166. Epub 2015 Aug 17. Nicotine Tob Res. 2016. PMID: 26283763 Free PMC article.
A Whole Methylome CpG-SNP Association Study of Psychosis in Blood and Brain Tissue.
van den Oord EJ, Clark SL, Xie LY, Shabalin AA, Dozmorov MG, Kumar G; Swedish Schizophrenia Consortium; Vladimirov VI, Magnusson PK, Aberg KA. van den Oord EJ, et al. Among authors: shabalin aa. Schizophr Bull. 2016 Jul;42(4):1018-26. doi: 10.1093/schbul/sbv182. Epub 2015 Dec 9. Schizophr Bull. 2016. PMID: 26656881 Free PMC article.
High density methylation QTL analysis in human blood via next-generation sequencing of the methylated genomic DNA fraction.
McClay JL, Shabalin AA, Dozmorov MG, Adkins DE, Kumar G, Nerella S, Clark SL, Bergen SE; Swedish Schizophrenia Consortium; Hultman CM, Magnusson PK, Sullivan PF, Aberg KA, van den Oord EJ. McClay JL, et al. Among authors: shabalin aa. Genome Biol. 2015 Dec 23;16:291. doi: 10.1186/s13059-015-0842-7. Genome Biol. 2015. PMID: 26699738 Free PMC article.
Correcting for cell-type effects in DNA methylation studies: reference-based method outperforms latent variable approaches in empirical studies.
Hattab MW, Shabalin AA, Clark SL, Zhao M, Kumar G, Chan RF, Xie LY, Jansen R, Han LK, Magnusson PK, van Grootheest G, Hultman CM, Penninx BW, Aberg KA, van den Oord EJ. Hattab MW, et al. Among authors: shabalin aa. Genome Biol. 2017 Jan 30;18(1):24. doi: 10.1186/s13059-017-1148-8. Genome Biol. 2017. PMID: 28137292 Free PMC article.
70 results