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Enabling enrichment analysis with the Human Disease Ontology.
LePendu P, Musen MA, Shah NH. LePendu P, et al. Among authors: shah nh. J Biomed Inform. 2011 Dec;44 Suppl 1(Suppl 1):S31-S38. doi: 10.1016/j.jbi.2011.04.007. Epub 2011 Apr 29. J Biomed Inform. 2011. PMID: 21550421 Free PMC article.
Biomedical ontologies: a functional perspective.
Rubin DL, Shah NH, Noy NF. Rubin DL, et al. Among authors: shah nh. Brief Bioinform. 2008 Jan;9(1):75-90. doi: 10.1093/bib/bbm059. Epub 2007 Dec 12. Brief Bioinform. 2008. PMID: 18077472 Review.
BioPortal: ontologies and integrated data resources at the click of a mouse.
Noy NF, Shah NH, Whetzel PL, Dai B, Dorf M, Griffith N, Jonquet C, Rubin DL, Storey MA, Chute CG, Musen MA. Noy NF, et al. Among authors: shah nh. Nucleic Acids Res. 2009 Jul;37(Web Server issue):W170-3. doi: 10.1093/nar/gkp440. Epub 2009 May 29. Nucleic Acids Res. 2009. PMID: 19483092 Free PMC article.
Comparison of concept recognizers for building the Open Biomedical Annotator.
Shah NH, Bhatia N, Jonquet C, Rubin D, Chiang AP, Musen MA. Shah NH, et al. BMC Bioinformatics. 2009 Sep 17;10 Suppl 9(Suppl 9):S14. doi: 10.1186/1471-2105-10-S9-S14. BMC Bioinformatics. 2009. PMID: 19761568 Free PMC article.
The National Center for Biomedical Ontology (NCBO) is developing a system for automated, ontology-based access to online biomedical resources (Shah NH, et al.: Ontology-driven indexing of public datasets for translational bioinformatics. ...
The National Center for Biomedical Ontology (NCBO) is developing a system for automated, ontology-based access to online biomedical resource …
Building a biomedical ontology recommender web service.
Jonquet C, Musen MA, Shah NH. Jonquet C, et al. Among authors: shah nh. J Biomed Semantics. 2010 Jun 22;1 Suppl 1(Suppl 1):S1. doi: 10.1186/2041-1480-1-S1-S1. J Biomed Semantics. 2010. PMID: 20626921 Free PMC article.
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