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Biomedical ontologies: a functional perspective.
Rubin DL, Shah NH, Noy NF. Rubin DL, et al. Among authors: shah nh. Brief Bioinform. 2008 Jan;9(1):75-90. doi: 10.1093/bib/bbm059. Epub 2007 Dec 12. Brief Bioinform. 2008. PMID: 18077472 Review.
BioPortal: ontologies and data resources with the click of a mouse.
Musen MA, Shah NH, Noy NF, Dai BY, Dorf M, Griffith N, Buntrok J, Jonquet C, Montegut MJ, Rubin DL. Musen MA, et al. Among authors: shah nh. AMIA Annu Symp Proc. 2008 Nov 6:1223-4. AMIA Annu Symp Proc. 2008. PMID: 18999306 No abstract available.
Comparison of concept recognizers for building the Open Biomedical Annotator.
Shah NH, Bhatia N, Jonquet C, Rubin D, Chiang AP, Musen MA. Shah NH, et al. BMC Bioinformatics. 2009 Sep 17;10 Suppl 9(Suppl 9):S14. doi: 10.1186/1471-2105-10-S9-S14. BMC Bioinformatics. 2009. PMID: 19761568 Free PMC article.
The National Center for Biomedical Ontology (NCBO) is developing a system for automated, ontology-based access to online biomedical resources (Shah NH, et al.: Ontology-driven indexing of public datasets for translational bioinformatics. ...
The National Center for Biomedical Ontology (NCBO) is developing a system for automated, ontology-based access to online biomedical resource …
Using text to build semantic networks for pharmacogenomics.
Coulet A, Shah NH, Garten Y, Musen M, Altman RB. Coulet A, et al. Among authors: shah nh. J Biomed Inform. 2010 Dec;43(6):1009-19. doi: 10.1016/j.jbi.2010.08.005. Epub 2010 Aug 17. J Biomed Inform. 2010. PMID: 20723615 Free PMC article.
Enabling enrichment analysis with the Human Disease Ontology.
LePendu P, Musen MA, Shah NH. LePendu P, et al. Among authors: shah nh. J Biomed Inform. 2011 Dec;44 Suppl 1(Suppl 1):S31-S38. doi: 10.1016/j.jbi.2011.04.007. Epub 2011 Apr 29. J Biomed Inform. 2011. PMID: 21550421 Free PMC article.
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