Shapiro BA - Search Results

1

Bolaamphiphiles as carriers for siRNA delivery: From chemical syntheses to practical applications.

Gupta K, Afonin KA, Viard M, Herrero V, Kasprzak W, Kagiampakis I, Kim T, Koyfman AY, Puri A, Stepler M, Sappe A, KewalRamani VN, Grinberg S, Linder C, Heldman E, Blumenthal R, Shapiro BA. Gupta K, et al. Among authors: shapiro ba. J Control Release. 2015 Sep 10;213:142-151. doi: 10.1016/j.jconrel.2015.06.041. Epub 2015 Jul 4. J Control Release. 2015. PMID: 26151705 Free PMC article.

2

STRUCTURELAB: a heterogeneous bioinformatics system for RNA structure analysis.

Shapiro BA, Kasprzak W. Shapiro BA, et al. J Mol Graph. 1996 Aug;14(4):194-205, 222-4. doi: 10.1016/s0263-7855(96)00063-x. J Mol Graph. 1996. PMID: 9076633

3

Stem Trace: an interactive visual tool for comparative RNA structure analysis.

Kasprzak W, Shapiro B. Kasprzak W, et al. Bioinformatics. 1999 Jan;15(1):16-31. doi: 10.1093/bioinformatics/15.1.16. Bioinformatics. 1999. PMID: 10068689

4

RNA folding pathway functional intermediates: their prediction and analysis.

Shapiro BA, Bengali D, Kasprzak W, Wu JC. Shapiro BA, et al. J Mol Biol. 2001 Sep 7;312(1):27-44. doi: 10.1006/jmbi.2001.4931. J Mol Biol. 2001. PMID: 11545583

5

Structural differentiation of the HIV-1 polyA signals.

Gee AH, Kasprzak W, Shapiro BA. Gee AH, et al. Among authors: shapiro ba. J Biomol Struct Dyn. 2006 Feb;23(4):417-28. doi: 10.1080/07391102.2006.10531236. J Biomol Struct Dyn. 2006. PMID: 16363877

6

Structural polymorphism of the HIV-1 leader region explored by computational methods.

Kasprzak W, Bindewald E, Shapiro BA. Kasprzak W, et al. Among authors: shapiro ba. Nucleic Acids Res. 2005 Dec 20;33(22):7151-63. doi: 10.1093/nar/gki1015. Print 2005. Nucleic Acids Res. 2005. PMID: 16371347 Free PMC article.

7

Graphical exploratory data analysis of RNA secondary structure dynamics predicted by the massively parallel genetic algorithm.

Shapiro BA, Kasprzak W, Grunewald C, Aman J. Shapiro BA, et al. J Mol Graph Model. 2006 Dec;25(4):514-31. doi: 10.1016/j.jmgm.2006.04.004. Epub 2006 Apr 28. J Mol Graph Model. 2006. PMID: 16725358

8

The role of cytokine mRNA stability in the pathogenesis of autoimmune disease.

Seko Y, Cole S, Kasprzak W, Shapiro BA, Ragheb JA. Seko Y, et al. Among authors: shapiro ba. Autoimmun Rev. 2006 May;5(5):299-305. doi: 10.1016/j.autrev.2005.10.013. Epub 2005 Dec 21. Autoimmun Rev. 2006. PMID: 16782553 Review.

9

The role of a metastable RNA secondary structure in hepatitis delta virus genotype III RNA editing.

Linnstaedt SD, Kasprzak WK, Shapiro BA, Casey JL. Linnstaedt SD, et al. Among authors: shapiro ba. RNA. 2006 Aug;12(8):1521-33. doi: 10.1261/rna.89306. Epub 2006 Jun 21. RNA. 2006. PMID: 16790843 Free PMC article.

10

Bridging the gap in RNA structure prediction.

Shapiro BA, Yingling YG, Kasprzak W, Bindewald E. Shapiro BA, et al. Curr Opin Struct Biol. 2007 Apr;17(2):157-65. doi: 10.1016/j.sbi.2007.03.001. Epub 2007 Mar 23. Curr Opin Struct Biol. 2007. PMID: 17383172 Review.

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