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Annotation of the zebrafish genome through an integrated transcriptomic and proteomic analysis.
Kelkar DS, Provost E, Chaerkady R, Muthusamy B, Manda SS, Subbannayya T, Selvan LD, Wang CH, Datta KK, Woo S, Dwivedi SB, Renuse S, Getnet D, Huang TC, Kim MS, Pinto SM, Mitchell CJ, Madugundu AK, Kumar P, Sharma J, Advani J, Dey G, Balakrishnan L, Syed N, Nanjappa V, Subbannayya Y, Goel R, Prasad TS, Bafna V, Sirdeshmukh R, Gowda H, Wang C, Leach SD, Pandey A. Kelkar DS, et al. Among authors: sharma j. Mol Cell Proteomics. 2014 Nov;13(11):3184-98. doi: 10.1074/mcp.M114.038299. Epub 2014 Jul 24. Mol Cell Proteomics. 2014. PMID: 25060758 Free PMC article.
A comprehensive manually curated reaction map of RANKL/RANK-signaling pathway.
Raju R, Balakrishnan L, Nanjappa V, Bhattacharjee M, Getnet D, Muthusamy B, Kurian Thomas J, Sharma J, Rahiman BA, Harsha HC, Shankar S, Prasad TS, Mohan SS, Bader GD, Wani MR, Pandey A. Raju R, et al. Among authors: sharma j. Database (Oxford). 2011 Jul 8;2011:bar021. doi: 10.1093/database/bar021. Print 2011. Database (Oxford). 2011. PMID: 21742767 Free PMC article.
Quantitative tissue proteomics of esophageal squamous cell carcinoma for novel biomarker discovery.
Pawar H, Kashyap MK, Sahasrabuddhe NA, Renuse S, Harsha HC, Kumar P, Sharma J, Kandasamy K, Marimuthu A, Nair B, Rajagopalan S, Maharudraiah J, Premalatha CS, Kumar KV, Vijayakumar M, Chaerkady R, Prasad TS, Kumar RV, Kumar RV, Pandey A. Pawar H, et al. Among authors: sharma j. Cancer Biol Ther. 2011 Sep 15;12(6):510-22. doi: 10.4161/cbt.12.6.16833. Epub 2011 Sep 15. Cancer Biol Ther. 2011. PMID: 21743296 Free PMC article.
NetSlim: high-confidence curated signaling maps.
Raju R, Nanjappa V, Balakrishnan L, Radhakrishnan A, Thomas JK, Sharma J, Tian M, Palapetta SM, Subbannayya T, Sekhar NR, Muthusamy B, Goel R, Subbannayya Y, Telikicherla D, Bhattacharjee M, Pinto SM, Syed N, Srikanth MS, Sathe GJ, Ahmad S, Chavan SN, Kumar GS, Marimuthu A, Prasad TS, Harsha HC, Rahiman BA, Ohara O, Bader GD, Sujatha Mohan S, Schiemann WP, Pandey A. Raju R, et al. Among authors: sharma j. Database (Oxford). 2011 Sep 29;2011:bar032. doi: 10.1093/database/bar032. Print 2011. Database (Oxford). 2011. PMID: 21959865 Free PMC article.
A comprehensive curated resource for follicle stimulating hormone signaling.
Telikicherla D, Ambekar A, Palapetta SM, Dwivedi SB, Raju R, Sharma J, Prasad TsK, Ramachandra Y, Mohan SS, Maharudraiah J, Mukherjee S, Pandey A. Telikicherla D, et al. Among authors: sharma j. BMC Res Notes. 2011 Oct 13;4:408. doi: 10.1186/1756-0500-4-408. BMC Res Notes. 2011. PMID: 21996254 Free PMC article.
TSLP signaling network revealed by SILAC-based phosphoproteomics.
Zhong J, Kim MS, Chaerkady R, Wu X, Huang TC, Getnet D, Mitchell CJ, Palapetta SM, Sharma J, O'Meally RN, Cole RN, Yoda A, Moritz A, Loriaux MM, Rush J, Weinstock DM, Tyner JW, Pandey A. Zhong J, et al. Among authors: sharma j. Mol Cell Proteomics. 2012 Jun;11(6):M112.017764. doi: 10.1074/mcp.M112.017764. Epub 2012 Feb 16. Mol Cell Proteomics. 2012. PMID: 22345495 Free PMC article.
A proteogenomic approach to map the proteome of an unsequenced pathogen - Leishmania donovani.
Pawar H, Sahasrabuddhe NA, Renuse S, Keerthikumar S, Sharma J, Kumar GS, Venugopal A, Sekhar NR, Kelkar DS, Nemade H, Khobragade SN, Muthusamy B, Kandasamy K, Harsha HC, Chaerkady R, Patole MS, Pandey A. Pawar H, et al. Among authors: sharma j. Proteomics. 2012 Mar;12(6):832-44. doi: 10.1002/pmic.201100505. Proteomics. 2012. PMID: 22539434
Downregulation of cornulin in esophageal squamous cell carcinoma.
Pawar H, Maharudraiah J, Kashyap MK, Sharma J, Srikanth SM, Choudhary R, Chavan S, Sathe G, Manju HC, Kumar KV, Vijayakumar M, Sirdeshmukh R, Harsha HC, Prasad TS, Pandey A, Kumar RV. Pawar H, et al. Among authors: sharma j. Acta Histochem. 2013 Mar;115(2):89-99. doi: 10.1016/j.acthis.2012.04.003. Epub 2012 May 5. Acta Histochem. 2013. PMID: 22560086
Proteomic analysis of an unsequenced plant--Mangifera indica.
Renuse S, Harsha HC, Kumar P, Acharya PK, Sharma J, Goel R, Kumar GS, Raju R, Prasad TS, Slotta T, Pandey A. Renuse S, et al. Among authors: sharma j. J Proteomics. 2012 Oct 22;75(18):5793-6. doi: 10.1016/j.jprot.2012.08.003. Epub 2012 Aug 10. J Proteomics. 2012. PMID: 22906602
Evaluation of protein expression pattern of stanniocalcin 2, insulin-like growth factor-binding protein 7, inhibin beta A and four and a half LIM domains 1 in esophageal squamous cell carcinoma.
Kashyap MK, Pawar HA, Keerthikumar S, Sharma J, Goel R, Mahmood R, Kumar MV, Kumar KV, Pandey A, Kumar RV, Prasad TS, Harsha HC. Kashyap MK, et al. Among authors: sharma j. Cancer Biomark. 2012-2013;12(1):1-9. doi: 10.3233/CBM-120289. Cancer Biomark. 2012. PMID: 23321464
2,685 results