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Metal-ion-specific screening of charge effects in protein amide H/D exchange and the Hofmeister series.
Abdolvahabi A, Gober JL, Mowery RA, Shi Y, Shaw BF. Abdolvahabi A, et al. Among authors: shaw bf. Anal Chem. 2014 Oct 21;86(20):10303-10. doi: 10.1021/ac502714v. Epub 2014 Sep 29. Anal Chem. 2014. PMID: 25207790
Local unfolding in a destabilized, pathogenic variant of superoxide dismutase 1 observed with H/D exchange and mass spectrometry.
Shaw BF, Durazo A, Nersissian AM, Whitelegge JP, Faull KF, Valentine JS. Shaw BF, et al. J Biol Chem. 2006 Jun 30;281(26):18167-76. doi: 10.1074/jbc.M600623200. Epub 2006 Apr 26. J Biol Chem. 2006. PMID: 16644738
Metal-free superoxide dismutase-1 and three different amyotrophic lateral sclerosis variants share a similar partially unfolded beta-barrel at physiological temperature.
Durazo A, Shaw BF, Chattopadhyay M, Faull KF, Nersissian AM, Valentine JS, Whitelegge JP. Durazo A, et al. Among authors: shaw bf. J Biol Chem. 2009 Dec 4;284(49):34382-9. doi: 10.1074/jbc.M109.052076. Epub 2009 Oct 5. J Biol Chem. 2009. PMID: 19805550 Free PMC article.
Taking charge of proteins from neurodegeneration to industrial biotechnology.
Shaw BF, Moustakas DT, Whitelegge JP, Faull KF. Shaw BF, et al. Adv Protein Chem Struct Biol. 2010;79:127-64. doi: 10.1016/S1876-1623(10)79004-0. Adv Protein Chem Struct Biol. 2010. PMID: 20621283 Review.
Neutralizing positive charges at the surface of a protein lowers its rate of amide hydrogen exchange without altering its structure or increasing its thermostability.
Shaw BF, Arthanari H, Narovlyansky M, Durazo A, Frueh DP, Pollastri MP, Lee A, Bilgicer B, Gygi SP, Wagner G, Whitesides GM. Shaw BF, et al. J Am Chem Soc. 2010 Dec 15;132(49):17411-25. doi: 10.1021/ja9067035. Epub 2010 Nov 19. J Am Chem Soc. 2010. PMID: 21090618 Free PMC article.
Complexes of native ubiquitin and dodecyl sulfate illustrate the nature of hydrophobic and electrostatic interactions in the binding of proteins and surfactants.
Shaw BF, Schneider GF, Arthanari H, Narovlyansky M, Moustakas D, Durazo A, Wagner G, Whitesides GM. Shaw BF, et al. J Am Chem Soc. 2011 Nov 9;133(44):17681-95. doi: 10.1021/ja205735q. Epub 2011 Oct 13. J Am Chem Soc. 2011. PMID: 21939262 Free PMC article.
Abnormal SDS-PAGE migration of cytosolic proteins can identify domains and mechanisms that control surfactant binding.
Shi Y, Mowery RA, Ashley J, Hentz M, Ramirez AJ, Bilgicer B, Slunt-Brown H, Borchelt DR, Shaw BF. Shi Y, et al. Among authors: shaw bf. Protein Sci. 2012 Aug;21(8):1197-209. doi: 10.1002/pro.2107. Protein Sci. 2012. PMID: 22692797 Free PMC article.
Effect of surfactant hydrophobicity on the pathway for unfolding of ubiquitin.
Shaw BF, Schneider GF, Whitesides GM. Shaw BF, et al. J Am Chem Soc. 2012 Nov 14;134(45):18739-45. doi: 10.1021/ja3079863. Epub 2012 Oct 31. J Am Chem Soc. 2012. PMID: 23095057 Free PMC article.
Effect of metal loading and subcellular pH on net charge of superoxide dismutase-1.
Shi Y, Mowery RA, Shaw BF. Shi Y, et al. Among authors: shaw bf. J Mol Biol. 2013 Nov 15;425(22):4388-404. doi: 10.1016/j.jmb.2013.07.018. Epub 2013 Jul 17. J Mol Biol. 2013. PMID: 23871896
Deamidation of asparagine to aspartate destabilizes Cu, Zn superoxide dismutase, accelerates fibrillization, and mirrors ALS-linked mutations.
Shi Y, Rhodes NR, Abdolvahabi A, Kohn T, Cook NP, Marti AA, Shaw BF. Shi Y, et al. Among authors: shaw bf. J Am Chem Soc. 2013 Oct 23;135(42):15897-908. doi: 10.1021/ja407801x. Epub 2013 Oct 10. J Am Chem Soc. 2013. PMID: 24066782
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