Shimba N - Search Results

1

Induced structure of a helical switch as a mechanism to regulate enzymatic activity.

Nomura AM, Marnett AB, Shimba N, Dötsch V, Craik CS. Nomura AM, et al. Among authors: shimba n. Nat Struct Mol Biol. 2005 Nov;12(11):1019-20. doi: 10.1038/nsmb1006. Nat Struct Mol Biol. 2005. PMID: 16244665

2

One functional switch mediates reversible and irreversible inactivation of a herpesvirus protease.

Nomura AM, Marnett AB, Shimba N, Dötsch V, Craik CS. Nomura AM, et al. Among authors: shimba n. Biochemistry. 2006 Mar 21;45(11):3572-9. doi: 10.1021/bi0523658. Biochemistry. 2006. PMID: 16533039

3

Communication between the active sites and dimer interface of a herpesvirus protease revealed by a transition-state inhibitor.

Marnett AB, Nomura AM, Shimba N, Ortiz de Montellano PR, Craik CS. Marnett AB, et al. Among authors: shimba n. Proc Natl Acad Sci U S A. 2004 May 4;101(18):6870-5. doi: 10.1073/pnas.0401613101. Epub 2004 Apr 26. Proc Natl Acad Sci U S A. 2004. PMID: 15118083 Free PMC article.

4

Herpesvirus protease inhibition by dimer disruption.

Shimba N, Nomura AM, Marnett AB, Craik CS. Shimba N, et al. J Virol. 2004 Jun;78(12):6657-65. doi: 10.1128/JVI.78.12.6657-6665.2004. J Virol. 2004. PMID: 15163756 Free PMC article.

5

Optimization of 13C direct detection NMR methods.

Shimba N, Kovacs H, Stern AS, Nomura AM, Shimada I, Hoch JC, Craik CS, Dötsch V. Shimba N, et al. J Biomol NMR. 2004 Oct;30(2):175-9. doi: 10.1023/B:JNMR.0000048855.35771.11. J Biomol NMR. 2004. PMID: 15557804

6

Elimination of 13Calpha splitting in protein NMR spectra by deconvolution with maximum entropy reconstruction.

Shimba N, Stern AS, Craik CS, Hoch JC, Dötsch V. Shimba N, et al. J Am Chem Soc. 2003 Mar 5;125(9):2382-3. doi: 10.1021/ja027973e. J Am Chem Soc. 2003. PMID: 12603112

7

Quantitative identification of the protonation state of histidines in vitro and in vivo.

Shimba N, Serber Z, Ledwidge R, Miller SM, Craik CS, Dötsch V. Shimba N, et al. Biochemistry. 2003 Aug 5;42(30):9227-34. doi: 10.1021/bi0344679. Biochemistry. 2003. PMID: 12885258

8

Methyl groups as probes for proteins and complexes in in-cell NMR experiments.

Serber Z, Straub W, Corsini L, Nomura AM, Shimba N, Craik CS, Ortiz de Montellano P, Dötsch V. Serber Z, et al. Among authors: shimba n. J Am Chem Soc. 2004 Jun 9;126(22):7119-25. doi: 10.1021/ja049977k. J Am Chem Soc. 2004. PMID: 15174883

9

Rapid identification of protein-protein interfaces for the construction of a complex model based on multiple unassigned signals by using time-sharing NMR measurements.

Kodama Y, Reese ML, Shimba N, Ono K, Kanamori E, Dötsch V, Noguchi S, Fukunishi Y, Suzuki E, Shimada I, Takahashi H. Kodama Y, et al. Among authors: shimba n. J Struct Biol. 2011 Jun;174(3):434-42. doi: 10.1016/j.jsb.2011.04.001. Epub 2011 Apr 9. J Struct Biol. 2011. PMID: 21501688

10

Structural basis of the transition-state stabilization in antibody-catalyzed hydrolysis.

Sakakura M, Takahashi H, Shimba N, Fujii I, Shimada I. Sakakura M, et al. Among authors: shimba n. J Mol Biol. 2007 Mar 16;367(1):133-47. doi: 10.1016/j.jmb.2006.12.037. Epub 2006 Dec 19. J Mol Biol. 2007. PMID: 17239396

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