Shimizu TS - Search Results

1

From molecular noise to behavioural variability in a single bacterium.

Korobkova E, Emonet T, Vilar JM, Shimizu TS, Cluzel P. Korobkova E, et al. Among authors: shimizu ts. Nature. 2004 Apr 1;428(6982):574-8. doi: 10.1038/nature02404. Nature. 2004. PMID: 15058306

2

Phenotypic diversity and temporal variability in a bacterial signaling network revealed by single-cell FRET.

Keegstra JM, Kamino K, Anquez F, Lazova MD, Emonet T, Shimizu TS. Keegstra JM, et al. Among authors: shimizu ts. Elife. 2017 Dec 12;6:e27455. doi: 10.7554/eLife.27455. Elife. 2017. PMID: 29231170 Free PMC article.

3

Adaptive tuning of cell sensory diversity without changes in gene expression.

Kamino K, Keegstra JM, Long J, Emonet T, Shimizu TS. Kamino K, et al. Among authors: shimizu ts. Sci Adv. 2020 Nov 13;6(46):eabc1087. doi: 10.1126/sciadv.abc1087. Print 2020 Nov. Sci Adv. 2020. PMID: 33188019 Free PMC article.

4

Optimal inference of molecular interaction dynamics in FRET microscopy.

Kamino K, Kadakia N, Avgidis F, Liu ZX, Aoki K, Shimizu TS, Emonet T. Kamino K, et al. Among authors: shimizu ts. Proc Natl Acad Sci U S A. 2023 Apr 11;120(15):e2211807120. doi: 10.1073/pnas.2211807120. Epub 2023 Apr 4. Proc Natl Acad Sci U S A. 2023. PMID: 37014867 Free PMC article.

5

Bacterial coexistence driven by motility and spatial competition.

Gude S, Pinçe E, Taute KM, Seinen AB, Shimizu TS, Tans SJ. Gude S, et al. Among authors: shimizu ts. Nature. 2020 Feb;578(7796):588-592. doi: 10.1038/s41586-020-2033-2. Epub 2020 Feb 19. Nature. 2020. PMID: 32076271

6

Bacterial chemotaxis in linear and nonlinear steady microfluidic gradients.

Ahmed T, Shimizu TS, Stocker R. Ahmed T, et al. Among authors: shimizu ts. Nano Lett. 2010 Sep 8;10(9):3379-85. doi: 10.1021/nl101204e. Nano Lett. 2010. PMID: 20669946 Free PMC article.

7

Signaling noise enhances chemotactic drift of E. coli.

Flores M, Shimizu TS, ten Wolde PR, Tostevin F. Flores M, et al. Among authors: shimizu ts. Phys Rev Lett. 2012 Oct 5;109(14):148101. doi: 10.1103/PhysRevLett.109.148101. Epub 2012 Oct 2. Phys Rev Lett. 2012. PMID: 23083290

8

Monitoring bacterial chemotaxis by using bioluminescence resonance energy transfer: absence of feedback from the flagellar motors.

Shimizu TS, Delalez N, Pichler K, Berg HC. Shimizu TS, et al. Proc Natl Acad Sci U S A. 2006 Feb 14;103(7):2093-7. doi: 10.1073/pnas.0510958103. Epub 2006 Feb 1. Proc Natl Acad Sci U S A. 2006. PMID: 16452163 Free PMC article.

9

Modeling the chemotactic response of Escherichia coli to time-varying stimuli.

Tu Y, Shimizu TS, Berg HC. Tu Y, et al. Among authors: shimizu ts. Proc Natl Acad Sci U S A. 2008 Sep 30;105(39):14855-60. doi: 10.1073/pnas.0807569105. Epub 2008 Sep 23. Proc Natl Acad Sci U S A. 2008. PMID: 18812513 Free PMC article.

10

High-throughput 3D tracking of bacteria on a standard phase contrast microscope.

Taute KM, Gude S, Tans SJ, Shimizu TS. Taute KM, et al. Among authors: shimizu ts. Nat Commun. 2015 Nov 2;6:8776. doi: 10.1038/ncomms9776. Nat Commun. 2015. PMID: 26522289 Free PMC article.

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