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In vivo measurement by FRET of pathway activity in bacterial chemotaxis.
Sourjik V, Vaknin A, Shimizu TS, Berg HC. Sourjik V, et al. Methods Enzymol. 2007;423:365-91. doi: 10.1016/S0076-6879(07)23017-4. Methods Enzymol. 2007. PMID: 17609141
Modelling the bacterial chemotaxis receptor complex.
Shimizu TS, Bray D. Shimizu TS, et al. Novartis Found Symp. 2002;247:162-77; discussion 177-81, 198-206, 244-52. Novartis Found Symp. 2002. PMID: 12539955 Review.
Looking inside the box: bacterial transistor arrays.
Shimizu TS, Le Novère N. Shimizu TS, et al. Mol Microbiol. 2008 Jul;69(1):5-9. doi: 10.1111/j.1365-2958.2008.06240.x. Epub 2008 May 12. Mol Microbiol. 2008. PMID: 18484950
Response rescaling in bacterial chemotaxis.
Lazova MD, Ahmed T, Bellomo D, Stocker R, Shimizu TS. Lazova MD, et al. Proc Natl Acad Sci U S A. 2011 Aug 16;108(33):13870-5. doi: 10.1073/pnas.1108608108. Epub 2011 Aug 1. Proc Natl Acad Sci U S A. 2011. PMID: 21808031 Free PMC article.
Monitoring bacterial chemotaxis by using bioluminescence resonance energy transfer: absence of feedback from the flagellar motors.
Shimizu TS, Delalez N, Pichler K, Berg HC. Shimizu TS, et al. Proc Natl Acad Sci U S A. 2006 Feb 14;103(7):2093-7. doi: 10.1073/pnas.0510958103. Epub 2006 Feb 1. Proc Natl Acad Sci U S A. 2006. PMID: 16452163 Free PMC article.
Bacterial chemotaxis in linear and nonlinear steady microfluidic gradients.
Ahmed T, Shimizu TS, Stocker R. Ahmed T, et al. Nano Lett. 2010 Sep 8;10(9):3379-85. doi: 10.1021/nl101204e. Nano Lett. 2010. PMID: 20669946 Free PMC article.
Microfluidics for bacterial chemotaxis.
Ahmed T, Shimizu TS, Stocker R. Ahmed T, et al. Integr Biol (Camb). 2010 Nov;2(11-12):604-29. doi: 10.1039/c0ib00049c. Epub 2010 Oct 21. Integr Biol (Camb). 2010. PMID: 20967322 Review.
Modeling the chemotactic response of Escherichia coli to time-varying stimuli.
Tu Y, Shimizu TS, Berg HC. Tu Y, et al. Proc Natl Acad Sci U S A. 2008 Sep 30;105(39):14855-60. doi: 10.1073/pnas.0807569105. Epub 2008 Sep 23. Proc Natl Acad Sci U S A. 2008. PMID: 18812513 Free PMC article.
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