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South-seeking magnetotactic bacteria in the Northern Hemisphere.
Simmons SL, Bazylinski DA, Edwards KJ. Simmons SL, et al. Science. 2006 Jan 20;311(5759):371-4. doi: 10.1126/science.1122843. Science. 2006. PMID: 16424338
Unexpected diversity in populations of the many-celled magnetotactic prokaryote.
Simmons SL, Edwards KJ. Simmons SL, et al. Environ Microbiol. 2007 Jan;9(1):206-15. doi: 10.1111/j.1462-2920.2006.01129.x. Environ Microbiol. 2007. PMID: 17227425
Leaf-FISH: Microscale Imaging of Bacterial Taxa on Phyllosphere.
Peredo EL, Simmons SL. Peredo EL, et al. Among authors: simmons sl. Front Microbiol. 2018 Jan 9;8:2669. doi: 10.3389/fmicb.2017.02669. eCollection 2017. Front Microbiol. 2018. PMID: 29375531 Free PMC article.
Functional and phylogenetic assembly of microbial communities in the human microbiome.
Shafquat A, Joice R, Simmons SL, Huttenhower C. Shafquat A, et al. Among authors: simmons sl. Trends Microbiol. 2014 May;22(5):261-6. doi: 10.1016/j.tim.2014.01.011. Epub 2014 Mar 5. Trends Microbiol. 2014. PMID: 24618403 Free PMC article. Review.
The effects of variable sample biomass on comparative metagenomics.
Chafee M, Maignien L, Simmons SL. Chafee M, et al. Among authors: simmons sl. Environ Microbiol. 2015 Jul;17(7):2239-53. doi: 10.1111/1462-2920.12668. Epub 2015 Jan 30. Environ Microbiol. 2015. PMID: 25329041
Spatiotemporal distribution of marine magnetotactic bacteria in a seasonally stratified coastal salt pond.
Simmons SL, Sievert SM, Frankel RB, Bazylinski DA, Edwards KJ. Simmons SL, et al. Appl Environ Microbiol. 2004 Oct;70(10):6230-9. doi: 10.1128/AEM.70.10.6230-6239.2004. Appl Environ Microbiol. 2004. PMID: 15466570 Free PMC article.
The dynamic genetic repertoire of microbial communities.
Wilmes P, Simmons SL, Denef VJ, Banfield JF. Wilmes P, et al. FEMS Microbiol Rev. 2009 Jan;33(1):109-32. doi: 10.1111/j.1574-6976.2008.00144.x. Epub 2008 Nov 24. FEMS Microbiol Rev. 2009. PMID: 19054116 Free PMC article. Review.
A semi-quantitative, synteny-based method to improve functional predictions for hypothetical and poorly annotated bacterial and archaeal genes.
Yelton AP, Thomas BC, Simmons SL, Wilmes P, Zemla A, Thelen MP, Justice N, Banfield JF. Yelton AP, et al. PLoS Comput Biol. 2011 Oct;7(10):e1002230. doi: 10.1371/journal.pcbi.1002230. Epub 2011 Oct 20. PLoS Comput Biol. 2011. PMID: 22028637 Free PMC article.
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