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LSD2/KDM1B and its cofactor NPAC/GLYR1 endow a structural and molecular model for regulation of H3K4 demethylation.
Fang R, Chen F, Dong Z, Hu D, Barbera AJ, Clark EA, Fang J, Yang Y, Mei P, Rutenberg M, Li Z, Zhang Y, Xu Y, Yang H, Wang P, Simon MD, Zhou Q, Li J, Marynick MP, Li X, Lu H, Kaiser UB, Kingston RE, Xu Y, Shi YG. Fang R, et al. Among authors: simon md. Mol Cell. 2013 Feb 7;49(3):558-70. doi: 10.1016/j.molcel.2012.11.019. Epub 2012 Dec 20. Mol Cell. 2013. PMID: 23260659 Free PMC article.
The genomic binding sites of a noncoding RNA.
Simon MD, Wang CI, Kharchenko PV, West JA, Chapman BA, Alekseyenko AA, Borowsky ML, Kuroda MI, Kingston RE. Simon MD, et al. Proc Natl Acad Sci U S A. 2011 Dec 20;108(51):20497-502. doi: 10.1073/pnas.1113536108. Epub 2011 Dec 5. Proc Natl Acad Sci U S A. 2011. PMID: 22143764 Free PMC article.
A chromatin-dependent role of the fragile X mental retardation protein FMRP in the DNA damage response.
Alpatov R, Lesch BJ, Nakamoto-Kinoshita M, Blanco A, Chen S, Stützer A, Armache KJ, Simon MD, Xu C, Ali M, Murn J, Prisic S, Kutateladze TG, Vakoc CR, Min J, Kingston RE, Fischle W, Warren ST, Page DC, Shi Y. Alpatov R, et al. Among authors: simon md. Cell. 2014 May 8;157(4):869-81. doi: 10.1016/j.cell.2014.03.040. Cell. 2014. PMID: 24813610 Free PMC article.
The long noncoding RNAs NEAT1 and MALAT1 bind active chromatin sites.
West JA, Davis CP, Sunwoo H, Simon MD, Sadreyev RI, Wang PI, Tolstorukov MY, Kingston RE. West JA, et al. Among authors: simon md. Mol Cell. 2014 Sep 4;55(5):791-802. doi: 10.1016/j.molcel.2014.07.012. Epub 2014 Aug 21. Mol Cell. 2014. PMID: 25155612 Free PMC article.
Probing Xist RNA Structure in Cells Using Targeted Structure-Seq.
Fang R, Moss WN, Rutenberg-Schoenberg M, Simon MD. Fang R, et al. Among authors: simon md. PLoS Genet. 2015 Dec 8;11(12):e1005668. doi: 10.1371/journal.pgen.1005668. eCollection 2015 Dec. PLoS Genet. 2015. PMID: 26646615 Free PMC article.
98 results