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Methods for cell and particle tracking.
Meijering E, Dzyubachyk O, Smal I. Meijering E, et al. Methods Enzymol. 2012;504:183-200. doi: 10.1016/B978-0-12-391857-4.00009-4. Methods Enzymol. 2012. PMID: 22264535 Review.
Bayesian tracking of elongated structures in 3D images.
Schaap M, Smal I, Metz C, van Walsum T, Niessen W. Schaap M, et al. Inf Process Med Imaging. 2007;20:74-85. doi: 10.1007/978-3-540-73273-0_7. Inf Process Med Imaging. 2007. PMID: 17633690
Bayesian tracking of tubular structures and its application to carotid arteries in CTA.
Schaap M, Manniesing R, Smal I, van Walsum T, van der Lugt A, Niessen W. Schaap M, et al. Med Image Comput Comput Assist Interv. 2007;10(Pt 2):562-70. doi: 10.1007/978-3-540-75759-7_68. Med Image Comput Comput Assist Interv. 2007. PMID: 18044613
Multiple object tracking in molecular bioimaging by Rao-Blackwellized marginal particle filtering.
Smal I, Meijering E, Draegestein K, Galjart N, Grigoriev I, Akhmanova A, van Royen ME, Houtsmuller AB, Niessen W. Smal I, et al. Med Image Anal. 2008 Dec;12(6):764-77. doi: 10.1016/j.media.2008.03.004. Epub 2008 Mar 31. Med Image Anal. 2008. PMID: 18457985
Particle filtering for multiple object tracking in dynamic fluorescence microscopy images: application to microtubule growth analysis.
Smal I, Draegestein K, Galjart N, Niessen W, Meijering E. Smal I, et al. IEEE Trans Med Imaging. 2008 Jun;27(6):789-804. doi: 10.1109/TMI.2008.916964. IEEE Trans Med Imaging. 2008. PMID: 18541486
Quantitative comparison of spot detection methods in fluorescence microscopy.
Smal I, Loog M, Niessen W, Meijering E. Smal I, et al. IEEE Trans Med Imaging. 2010 Feb;29(2):282-301. doi: 10.1109/TMI.2009.2025127. Epub 2009 Jun 23. IEEE Trans Med Imaging. 2010. PMID: 19556194
Tracking in cell and developmental biology.
Meijering E, Dzyubachyk O, Smal I, van Cappellen WA. Meijering E, et al. Semin Cell Dev Biol. 2009 Oct;20(8):894-902. doi: 10.1016/j.semcdb.2009.07.004. Epub 2009 Aug 4. Semin Cell Dev Biol. 2009. PMID: 19660567 Review.
Microtubule dynamics analysis using kymographs and variable-rate particle filters.
Smal I, Grigoriev I, Akhmanova A, Niessen WJ, Meijering E. Smal I, et al. IEEE Trans Image Process. 2010 Jul;19(7):1861-76. doi: 10.1109/TIP.2010.2045031. Epub 2010 Mar 11. IEEE Trans Image Process. 2010. PMID: 20227980
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