Smallwood SA - Search Results

1

Single-cell epigenomics: powerful new methods for understanding gene regulation and cell identity.

Clark SJ, Lee HJ, Smallwood SA, Kelsey G, Reik W. Clark SJ, et al. Among authors: smallwood sa. Genome Biol. 2016 Apr 18;17:72. doi: 10.1186/s13059-016-0944-x. Genome Biol. 2016. PMID: 27091476 Free PMC article. Review.

2

Multi-omics profiling of mouse gastrulation at single-cell resolution.

Argelaguet R, Clark SJ, Mohammed H, Stapel LC, Krueger C, Kapourani CA, Imaz-Rosshandler I, Lohoff T, Xiang Y, Hanna CW, Smallwood S, Ibarra-Soria X, Buettner F, Sanguinetti G, Xie W, Krueger F, Göttgens B, Rugg-Gunn PJ, Kelsey G, Dean W, Nichols J, Stegle O, Marioni JC, Reik W. Argelaguet R, et al. Nature. 2019 Dec;576(7787):487-491. doi: 10.1038/s41586-019-1825-8. Epub 2019 Dec 11. Nature. 2019. PMID: 31827285 Free PMC article.

3

De novo DNA methylation: a germ cell perspective.

Smallwood SA, Kelsey G. Smallwood SA, et al. Trends Genet. 2012 Jan;28(1):33-42. doi: 10.1016/j.tig.2011.09.004. Epub 2011 Oct 21. Trends Genet. 2012. PMID: 22019337 Review.

4

Single-cell genome-wide bisulfite sequencing for assessing epigenetic heterogeneity.

Smallwood SA, Lee HJ, Angermueller C, Krueger F, Saadeh H, Peat J, Andrews SR, Stegle O, Reik W, Kelsey G. Smallwood SA, et al. Nat Methods. 2014 Aug;11(8):817-820. doi: 10.1038/nmeth.3035. Epub 2014 Jul 20. Nat Methods. 2014. PMID: 25042786 Free PMC article.

5

Genome-wide base-resolution mapping of DNA methylation in single cells using single-cell bisulfite sequencing (scBS-seq).

Clark SJ, Smallwood SA, Lee HJ, Krueger F, Reik W, Kelsey G. Clark SJ, et al. Among authors: smallwood sa. Nat Protoc. 2017 Mar;12(3):534-547. doi: 10.1038/nprot.2016.187. Epub 2017 Feb 9. Nat Protoc. 2017. PMID: 28182018

6

Genome-Wide Analysis of DNA Methylation in Single Cells Using a Post-bisulfite Adapter Tagging Approach.

Lee HJ, Smallwood SA. Lee HJ, et al. Among authors: smallwood sa. Methods Mol Biol. 2018;1712:87-95. doi: 10.1007/978-1-4939-7514-3_7. Methods Mol Biol. 2018. PMID: 29224070

7

Genome-Scale Oscillations in DNA Methylation during Exit from Pluripotency.

Rulands S, Lee HJ, Clark SJ, Angermueller C, Smallwood SA, Krueger F, Mohammed H, Dean W, Nichols J, Rugg-Gunn P, Kelsey G, Stegle O, Simons BD, Reik W. Rulands S, et al. Among authors: smallwood sa. Cell Syst. 2018 Jul 25;7(1):63-76.e12. doi: 10.1016/j.cels.2018.06.012. Cell Syst. 2018. PMID: 30031774 Free PMC article.

8

Parallel single-cell sequencing links transcriptional and epigenetic heterogeneity.

Angermueller C, Clark SJ, Lee HJ, Macaulay IC, Teng MJ, Hu TX, Krueger F, Smallwood S, Ponting CP, Voet T, Kelsey G, Stegle O, Reik W. Angermueller C, et al. Nat Methods. 2016 Mar;13(3):229-232. doi: 10.1038/nmeth.3728. Epub 2016 Jan 11. Nat Methods. 2016. PMID: 26752769 Free PMC article.

9

Dynamic CpG island methylation landscape in oocytes and preimplantation embryos.

Smallwood SA, Tomizawa S, Krueger F, Ruf N, Carli N, Segonds-Pichon A, Sato S, Hata K, Andrews SR, Kelsey G. Smallwood SA, et al. Nat Genet. 2011 Jun 26;43(8):811-4. doi: 10.1038/ng.864. Nat Genet. 2011. PMID: 21706000 Free PMC article.

10

Genome-wide analysis of DNA methylation in low cell numbers by reduced representation bisulfite sequencing.

Smallwood SA, Kelsey G. Smallwood SA, et al. Methods Mol Biol. 2012;925:187-97. doi: 10.1007/978-1-62703-011-3_12. Methods Mol Biol. 2012. PMID: 22907498

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