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Using delta 15N values in algal tissue to map locations and potential sources of anthropogenic nutrient inputs on the island of Maui, Hawai'i, USA.
Dailer ML, Knox RS, Smith JE, Napier M, Smith CM. Dailer ML, et al. Mar Pollut Bull. 2010 May;60(5):655-71. doi: 10.1016/j.marpolbul.2009.12.021. Epub 2010 Jan 12. Mar Pollut Bull. 2010. PMID: 20070989
Re-evaluating the health of coral reef communities: baselines and evidence for human impacts across the central Pacific.
Smith JE, Brainard R, Carter A, Grillo S, Edwards C, Harris J, Lewis L, Obura D, Rohwer F, Sala E, Vroom PS, Sandin S. Smith JE, et al. Proc Biol Sci. 2016 Jan 13;283(1822):20151985. doi: 10.1098/rspb.2015.1985. Proc Biol Sci. 2016. PMID: 26740615 Free PMC article.
Global microbialization of coral reefs.
Haas AF, Fairoz MF, Kelly LW, Nelson CE, Dinsdale EA, Edwards RA, Giles S, Hatay M, Hisakawa N, Knowles B, Lim YW, Maughan H, Pantos O, Roach TN, Sanchez SE, Silveira CB, Sandin S, Smith JE, Rohwer F. Haas AF, et al. Nat Microbiol. 2016 Apr 25;1(6):16042. doi: 10.1038/nmicrobiol.2016.42. Nat Microbiol. 2016. PMID: 27572833
Towards Automated Annotation of Benthic Survey Images: Variability of Human Experts and Operational Modes of Automation.
Beijbom O, Edmunds PJ, Roelfsema C, Smith J, Kline DI, Neal BP, Dunlap MJ, Moriarty V, Fan TY, Tan CJ, Chan S, Treibitz T, Gamst A, Mitchell BG, Kriegman D. Beijbom O, et al. PLoS One. 2015 Jul 8;10(7):e0130312. doi: 10.1371/journal.pone.0130312. eCollection 2015. PLoS One. 2015. PMID: 26154157 Free PMC article.
Local genomic adaptation of coral reef-associated microbiomes to gradients of natural variability and anthropogenic stressors.
Kelly LW, Williams GJ, Barott KL, Carlson CA, Dinsdale EA, Edwards RA, Haas AF, Haynes M, Lim YW, McDole T, Nelson CE, Sala E, Sandin SA, Smith JE, Vermeij MJ, Youle M, Rohwer F. Kelly LW, et al. Proc Natl Acad Sci U S A. 2014 Jul 15;111(28):10227-32. doi: 10.1073/pnas.1403319111. Epub 2014 Jun 30. Proc Natl Acad Sci U S A. 2014. PMID: 24982156 Free PMC article.
Coral and macroalgal exudates vary in neutral sugar composition and differentially enrich reef bacterioplankton lineages.
Nelson CE, Goldberg SJ, Wegley Kelly L, Haas AF, Smith JE, Rohwer F, Carlson CA. Nelson CE, et al. ISME J. 2013 May;7(5):962-79. doi: 10.1038/ismej.2012.161. Epub 2013 Jan 10. ISME J. 2013. PMID: 23303369 Free PMC article.
Ocean warming and acidification have complex interactive effects on the dynamics of a marine fungal disease.
Williams GJ, Price NN, Ushijima B, Aeby GS, Callahan S, Davy SK, Gove JM, Johnson MD, Knapp IS, Shore-Maggio A, Smith JE, Videau P, Work TM. Williams GJ, et al. Proc Biol Sci. 2014 Jan 22;281(1778):20133069. doi: 10.1098/rspb.2013.3069. Print 2014 Mar 7. Proc Biol Sci. 2014. PMID: 24452029 Free PMC article.
Baselines and degradation of coral reefs in the Northern Line Islands.
Sandin SA, Smith JE, Demartini EE, Dinsdale EA, Donner SD, Friedlander AM, Konotchick T, Malay M, Maragos JE, Obura D, Pantos O, Paulay G, Richie M, Rohwer F, Schroeder RE, Walsh S, Jackson JB, Knowlton N, Sala E. Sandin SA, et al. PLoS One. 2008 Feb 27;3(2):e1548. doi: 10.1371/journal.pone.0001548. PLoS One. 2008. PMID: 18301734 Free PMC article.
Hyperspectral and physiological analyses of coral-algal interactions.
Barott K, Smith J, Dinsdale E, Hatay M, Sandin S, Rohwer F. Barott K, et al. PLoS One. 2009 Nov 26;4(11):e8043. doi: 10.1371/journal.pone.0008043. PLoS One. 2009. PMID: 19956632 Free PMC article.
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