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Profiling constitutive proteolytic events in vivo.
Timmer JC, Enoksson M, Wildfang E, Zhu W, Igarashi Y, Denault JB, Ma Y, Dummitt B, Chang YH, Mast AE, Eroshkin A, Smith JW, Tao WA, Salvesen GS. Timmer JC, et al. Among authors: smith jw. Biochem J. 2007 Oct 1;407(1):41-8. doi: 10.1042/BJ20070775. Biochem J. 2007. PMID: 17650073 Free PMC article.
CutDB: a proteolytic event database.
Igarashi Y, Eroshkin A, Gramatikova S, Gramatikoff K, Zhang Y, Smith JW, Osterman AL, Godzik A. Igarashi Y, et al. Among authors: smith jw. Nucleic Acids Res. 2007 Jan;35(Database issue):D546-9. doi: 10.1093/nar/gkl813. Epub 2006 Nov 16. Nucleic Acids Res. 2007. PMID: 17142225 Free PMC article.
PMAP: databases for analyzing proteolytic events and pathways.
Igarashi Y, Heureux E, Doctor KS, Talwar P, Gramatikova S, Gramatikoff K, Zhang Y, Blinov M, Ibragimova SS, Boyd S, Ratnikov B, Cieplak P, Godzik A, Smith JW, Osterman AL, Eroshkin AM. Igarashi Y, et al. Among authors: smith jw. Nucleic Acids Res. 2009 Jan;37(Database issue):D611-8. doi: 10.1093/nar/gkn683. Epub 2008 Oct 8. Nucleic Acids Res. 2009. PMID: 18842634 Free PMC article.
Mass spectrometry-based label-free quantitative proteomics.
Zhu W, Smith JW, Huang CM. Zhu W, et al. Among authors: smith jw. J Biomed Biotechnol. 2010;2010:840518. doi: 10.1155/2010/840518. Epub 2009 Nov 10. J Biomed Biotechnol. 2010. PMID: 19911078 Free PMC article. Review.
Structural determinants of limited proteolysis.
Kazanov MD, Igarashi Y, Eroshkin AM, Cieplak P, Ratnikov B, Zhang Y, Li Z, Godzik A, Osterman AL, Smith JW. Kazanov MD, et al. Among authors: smith jw. J Proteome Res. 2011 Aug 5;10(8):3642-51. doi: 10.1021/pr200271w. Epub 2011 Jul 8. J Proteome Res. 2011. PMID: 21682278 Free PMC article.
Basis for substrate recognition and distinction by matrix metalloproteinases.
Ratnikov BI, Cieplak P, Gramatikoff K, Pierce J, Eroshkin A, Igarashi Y, Kazanov M, Sun Q, Godzik A, Osterman A, Stec B, Strongin A, Smith JW. Ratnikov BI, et al. Among authors: smith jw. Proc Natl Acad Sci U S A. 2014 Oct 7;111(40):E4148-55. doi: 10.1073/pnas.1406134111. Epub 2014 Sep 22. Proc Natl Acad Sci U S A. 2014. PMID: 25246591 Free PMC article.
Proteins and an inflammatory network expressed in colon tumors.
Zhu W, Fang C, Gramatikoff K, Niemeyer CC, Smith JW. Zhu W, et al. Among authors: smith jw. J Proteome Res. 2011 May 6;10(5):2129-39. doi: 10.1021/pr101190f. Epub 2011 Apr 12. J Proteome Res. 2011. PMID: 21366352 Free PMC article.
1,526 results