Smith MA - Search Results

1

Mercer TR, Neph S, Dinger ME, Crawford J, Smith MA, Shearwood AM, Haugen E, Bracken CP, Rackham O, Stamatoyannopoulos JA, Filipovska A, Mattick JS. Mercer TR, et al. Among authors: smith ma. Cell. 2011 Aug 19;146(4):645-58. doi: 10.1016/j.cell.2011.06.051. Cell. 2011. PMID: 21854988 Free PMC article.

2

SNORD-host RNA Zfas1 is a regulator of mammary development and a potential marker for breast cancer.

Askarian-Amiri ME, Crawford J, French JD, Smart CE, Smith MA, Clark MB, Ru K, Mercer TR, Thompson ER, Lakhani SR, Vargas AC, Campbell IG, Brown MA, Dinger ME, Mattick JS. Askarian-Amiri ME, et al. Among authors: smith ma. RNA. 2011 May;17(5):878-91. doi: 10.1261/rna.2528811. Epub 2011 Apr 1. RNA. 2011. PMID: 21460236 Free PMC article.

3

RNA Duplex Map in Living Cells Reveals Higher-Order Transcriptome Structure.

Lu Z, Zhang QC, Lee B, Flynn RA, Smith MA, Robinson JT, Davidovich C, Gooding AR, Goodrich KJ, Mattick JS, Mesirov JP, Cech TR, Chang HY. Lu Z, et al. Among authors: smith ma. Cell. 2016 May 19;165(5):1267-1279. doi: 10.1016/j.cell.2016.04.028. Epub 2016 May 12. Cell. 2016. PMID: 27180905 Free PMC article.

4

The dark matter rises: the expanding world of regulatory RNAs.

Clark MB, Choudhary A, Smith MA, Taft RJ, Mattick JS. Clark MB, et al. Among authors: smith ma. Essays Biochem. 2013;54:1-16. doi: 10.1042/bse0540001. Essays Biochem. 2013. PMID: 23829523 Review.

5

Widespread purifying selection on RNA structure in mammals.

Smith MA, Gesell T, Stadler PF, Mattick JS. Smith MA, et al. Nucleic Acids Res. 2013 Sep;41(17):8220-36. doi: 10.1093/nar/gkt596. Epub 2013 Jul 11. Nucleic Acids Res. 2013. PMID: 23847102 Free PMC article.

6

Structural and Functional Annotation of Long Noncoding RNAs.

Smith MA, Mattick JS. Smith MA, et al. Methods Mol Biol. 2017;1526:65-85. doi: 10.1007/978-1-4939-6613-4_4. Methods Mol Biol. 2017. PMID: 27896736

7

Synthetic microbe communities provide internal reference standards for metagenome sequencing and analysis.

Hardwick SA, Chen WY, Wong T, Kanakamedala BS, Deveson IW, Ongley SE, Santini NS, Marcellin E, Smith MA, Nielsen LK, Lovelock CE, Neilan BA, Mercer TR. Hardwick SA, et al. Among authors: smith ma. Nat Commun. 2018 Aug 6;9(1):3096. doi: 10.1038/s41467-018-05555-0. Nat Commun. 2018. PMID: 30082706 Free PMC article.

8

The melanoma-upregulated long noncoding RNA SPRY4-IT1 modulates apoptosis and invasion.

Khaitan D, Dinger ME, Mazar J, Crawford J, Smith MA, Mattick JS, Perera RJ. Khaitan D, et al. Among authors: smith ma. Cancer Res. 2011 Jun 1;71(11):3852-62. doi: 10.1158/0008-5472.CAN-10-4460. Epub 2011 May 10. Cancer Res. 2011. PMID: 21558391

9

The RNA modification landscape in human disease.

Jonkhout N, Tran J, Smith MA, Schonrock N, Mattick JS, Novoa EM. Jonkhout N, et al. Among authors: smith ma. RNA. 2017 Dec;23(12):1754-1769. doi: 10.1261/rna.063503.117. Epub 2017 Aug 30. RNA. 2017. PMID: 28855326 Free PMC article. Review.

10

DotAligner: identification and clustering of RNA structure motifs.

Smith MA, Seemann SE, Quek XC, Mattick JS. Smith MA, et al. Genome Biol. 2017 Dec 28;18(1):244. doi: 10.1186/s13059-017-1371-3. Genome Biol. 2017. PMID: 29284541 Free PMC article.

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