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Statistical issues in cDNA microarray data analysis.
Smyth GK, Yang YH, Speed T. Smyth GK, et al. Methods Mol Biol. 2003;224:111-36. doi: 10.1385/1-59259-364-X:111. Methods Mol Biol. 2003. PMID: 12710670 No abstract available.
Normalization of cDNA microarray data.
Smyth GK, Speed T. Smyth GK, et al. Methods. 2003 Dec;31(4):265-73. doi: 10.1016/s1046-2023(03)00155-5. Methods. 2003. PMID: 14597310
Statistical modeling of sequencing errors in SAGE libraries.
Beissbarth T, Hyde L, Smyth GK, Job C, Boon WM, Tan SS, Scott HS, Speed TP. Beissbarth T, et al. Bioinformatics. 2004 Aug 4;20 Suppl 1:i31-9. doi: 10.1093/bioinformatics/bth924. Bioinformatics. 2004. PMID: 15262778
limmaGUI: a graphical user interface for linear modeling of microarray data.
Wettenhall JM, Smyth GK. Wettenhall JM, et al. Bioinformatics. 2004 Dec 12;20(18):3705-6. doi: 10.1093/bioinformatics/bth449. Epub 2004 Aug 5. Bioinformatics. 2004. PMID: 15297296
Empirical array quality weights in the analysis of microarray data.
Ritchie ME, Diyagama D, Neilson J, van Laar R, Dobrovic A, Holloway A, Smyth GK. Ritchie ME, et al. BMC Bioinformatics. 2006 May 19;7:261. doi: 10.1186/1471-2105-7-261. BMC Bioinformatics. 2006. PMID: 16712727 Free PMC article.
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