Sogin ML - Search Results

1

Editorial: New Insights into Microbial Ecology through Subtle Nucleotide Variation.

Eren AM, Sogin ML, Maignien L. Eren AM, et al. Among authors: sogin ml. Front Microbiol. 2016 Aug 24;7:1318. doi: 10.3389/fmicb.2016.01318. eCollection 2016. Front Microbiol. 2016. PMID: 27605925 Free PMC article. No abstract available.

2

Oligotyping: Differentiating between closely related microbial taxa using 16S rRNA gene data.

Eren AM, Maignien L, Sul WJ, Murphy LG, Grim SL, Morrison HG, Sogin ML. Eren AM, et al. Among authors: sogin ml. Methods Ecol Evol. 2013 Dec 1;4(12):1111-9. doi: 10.1111/2041-210X.12114. Methods Ecol Evol. 2013. PMID: 24358444 Free PMC article.

3

Comparison of Sewage and Animal Fecal Microbiomes by Using Oligotyping Reveals Potential Human Fecal Indicators in Multiple Taxonomic Groups.

Fisher JC, Eren AM, Green HC, Shanks OC, Morrison HG, Vineis JH, Sogin ML, McLellan SL. Fisher JC, et al. Among authors: sogin ml. Appl Environ Microbiol. 2015 Oct;81(20):7023-33. doi: 10.1128/AEM.01524-15. Epub 2015 Jul 31. Appl Environ Microbiol. 2015. PMID: 26231648 Free PMC article.

4

Millions of reads, thousands of taxa: microbial community structure and associations analyzed via marker genes.

Bálint M, Bahram M, Eren AM, Faust K, Fuhrman JA, Lindahl B, O'Hara RB, Öpik M, Sogin ML, Unterseher M, Tedersoo L. Bálint M, et al. Among authors: sogin ml. FEMS Microbiol Rev. 2016 Sep;40(5):686-700. doi: 10.1093/femsre/fuw017. Epub 2016 Jun 29. FEMS Microbiol Rev. 2016. PMID: 27358393 Review.

5

A filtering method to generate high quality short reads using illumina paired-end technology.

Eren AM, Vineis JH, Morrison HG, Sogin ML. Eren AM, et al. Among authors: sogin ml. PLoS One. 2013 Jun 17;8(6):e66643. doi: 10.1371/journal.pone.0066643. Print 2013. PLoS One. 2013. PMID: 23799126 Free PMC article.

6

A single genus in the gut microbiome reflects host preference and specificity.

Eren AM, Sogin ML, Morrison HG, Vineis JH, Fisher JC, Newton RJ, McLellan SL. Eren AM, et al. Among authors: sogin ml. ISME J. 2015 Jan;9(1):90-100. doi: 10.1038/ismej.2014.97. Epub 2014 Jun 17. ISME J. 2015. PMID: 24936765 Free PMC article.

7

Minimum entropy decomposition: unsupervised oligotyping for sensitive partitioning of high-throughput marker gene sequences.

Eren AM, Morrison HG, Lescault PJ, Reveillaud J, Vineis JH, Sogin ML. Eren AM, et al. Among authors: sogin ml. ISME J. 2015 Mar 17;9(4):968-79. doi: 10.1038/ismej.2014.195. ISME J. 2015. PMID: 25325381 Free PMC article.

8

Sewage reflects the microbiomes of human populations.

Newton RJ, McLellan SL, Dila DK, Vineis JH, Morrison HG, Eren AM, Sogin ML. Newton RJ, et al. Among authors: sogin ml. mBio. 2015 Feb 24;6(2):e02574. doi: 10.1128/mBio.02574-14. mBio. 2015. PMID: 25714718 Free PMC article.

9

Anvi'o: an advanced analysis and visualization platform for 'omics data.

Eren AM, Esen ÖC, Quince C, Vineis JH, Morrison HG, Sogin ML, Delmont TO. Eren AM, et al. Among authors: sogin ml. PeerJ. 2015 Oct 8;3:e1319. doi: 10.7717/peerj.1319. eCollection 2015. PeerJ. 2015. PMID: 26500826 Free PMC article.

10

Early-Life Microbial Restitution Reduces Colitis Risk Promoted by Antibiotic-Induced Gut Dysbiosis in Interleukin 10^-/- Mice.

Miyoshi J, Miyoshi S, Delmont TO, Cham C, Lee STM, Sakatani A, Yang K, Shan Y, Kennedy M, Kiefl E, Yousef M, Crosson S, Sogin M, Antonopoulos DA, Eren AM, Leone V, Chang EB. Miyoshi J, et al. Gastroenterology. 2021 Sep;161(3):940-952.e15. doi: 10.1053/j.gastro.2021.05.054. Epub 2021 Jun 7. Gastroenterology. 2021. PMID: 34111469 Free PMC article.

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