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Table representation of search results timeline featuring number of search results per year.

Year Number of Results
1992 3
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1997 4
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1999 2
2000 4
2001 6
2002 7
2003 3
2004 13
2005 12
2006 8
2007 8
2008 10
2009 10
2010 5
2011 5
2012 6
2013 8
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2016 6
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183 results

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Page 1
Pfam: The protein families database in 2021.
Mistry J, Chuguransky S, Williams L, Qureshi M, Salazar GA, Sonnhammer ELL, Tosatto SCE, Paladin L, Raj S, Richardson LJ, Finn RD, Bateman A. Mistry J, et al. Among authors: sonnhammer ell. Nucleic Acids Res. 2021 Jan 8;49(D1):D412-D419. doi: 10.1093/nar/gkaa913. Nucleic Acids Res. 2021. PMID: 33125078 Free PMC article.
Domainoid: domain-oriented orthology inference.
Persson E, Kaduk M, Forslund SK, Sonnhammer ELL. Persson E, et al. Among authors: sonnhammer ell. BMC Bioinformatics. 2019 Oct 28;20(1):523. doi: 10.1186/s12859-019-3137-2. BMC Bioinformatics. 2019. PMID: 31660857 Free PMC article.
Evolution of protein domain architectures.
Forslund K, Sonnhammer EL. Forslund K, et al. Among authors: sonnhammer el. Methods Mol Biol. 2012;856:187-216. doi: 10.1007/978-1-61779-585-5_8. Methods Mol Biol. 2012. PMID: 22399460 Review.
Evolution of Protein Domain Architectures.
Forslund SK, Kaduk M, Sonnhammer ELL. Forslund SK, et al. Among authors: sonnhammer ell. Methods Mol Biol. 2019;1910:469-504. doi: 10.1007/978-1-4939-9074-0_15. Methods Mol Biol. 2019. PMID: 31278674
Pfam: the protein families database.
Finn RD, Bateman A, Clements J, Coggill P, Eberhardt RY, Eddy SR, Heger A, Hetherington K, Holm L, Mistry J, Sonnhammer EL, Tate J, Punta M. Finn RD, et al. Among authors: sonnhammer el. Nucleic Acids Res. 2014 Jan;42(Database issue):D222-30. doi: 10.1093/nar/gkt1223. Epub 2013 Nov 27. Nucleic Acids Res. 2014. PMID: 24288371 Free PMC article.
The Quest for Orthologs orthology benchmark service in 2022.
Nevers Y, Jones TEM, Jyothi D, Yates B, Ferret M, Portell-Silva L, Codo L, Cosentino S, Marcet-Houben M, Vlasova A, Poidevin L, Kress A, Hickman M, Persson E, Piližota I, Guijarro-Clarke C; OpenEBench team the Quest for Orthologs Consortium; Iwasaki W, Lecompte O, Sonnhammer E, Roos DS, Gabaldón T, Thybert D, Thomas PD, Hu Y, Emms DM, Bruford E, Capella-Gutierrez S, Martin MJ, Dessimoz C, Altenhoff A. Nevers Y, et al. Among authors: sonnhammer e. Nucleic Acids Res. 2022 Jul 5;50(W1):W623-W632. doi: 10.1093/nar/gkac330. Nucleic Acids Res. 2022. PMID: 35552456 Free PMC article.
Fusion transcript detection using spatial transcriptomics.
Friedrich S, Sonnhammer ELL. Friedrich S, et al. Among authors: sonnhammer ell. BMC Med Genomics. 2020 Aug 4;13(1):110. doi: 10.1186/s12920-020-00738-5. BMC Med Genomics. 2020. PMID: 32753032 Free PMC article.
Quest for Orthologs in the Era of Biodiversity Genomics.
Langschied F, Bordin N, Cosentino S, Fuentes-Palacios D, Glover N, Hiller M, Hu Y, Huerta-Cepas J, Coelho LP, Iwasaki W, Majidian S, Manzano-Morales S, Persson E, Richards TA, Gabaldón T, Sonnhammer E, Thomas PD, Dessimoz C, Ebersberger I. Langschied F, et al. Among authors: sonnhammer e. Genome Biol Evol. 2024 Oct 9;16(10):evae224. doi: 10.1093/gbe/evae224. Genome Biol Evol. 2024. PMID: 39404012 Free PMC article. Review.
183 results