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HieranoiDB: a database of orthologs inferred by Hieranoid.
Kaduk M, Riegler C, Lemp O, Sonnhammer EL. Kaduk M, et al. Among authors: sonnhammer el. Nucleic Acids Res. 2017 Jan 4;45(D1):D687-D690. doi: 10.1093/nar/gkw923. Epub 2016 Oct 13. Nucleic Acids Res. 2017. PMID: 27742821 Free PMC article.
OrthoDisease: a database of human disease orthologs.
O'Brien KP, Westerlund I, Sonnhammer EL. O'Brien KP, et al. Among authors: sonnhammer el. Hum Mutat. 2004 Aug;24(2):112-9. doi: 10.1002/humu.20068. Hum Mutat. 2004. PMID: 15241792
Inparanoid: a comprehensive database of eukaryotic orthologs.
O'Brien KP, Remm M, Sonnhammer EL. O'Brien KP, et al. Among authors: sonnhammer el. Nucleic Acids Res. 2005 Jan 1;33(Database issue):D476-80. doi: 10.1093/nar/gki107. Nucleic Acids Res. 2005. PMID: 15608241 Free PMC article.
InParanoid 7: new algorithms and tools for eukaryotic orthology analysis.
Ostlund G, Schmitt T, Forslund K, Köstler T, Messina DN, Roopra S, Frings O, Sonnhammer EL. Ostlund G, et al. Among authors: sonnhammer el. Nucleic Acids Res. 2010 Jan;38(Database issue):D196-203. doi: 10.1093/nar/gkp931. Epub 2009 Nov 5. Nucleic Acids Res. 2010. PMID: 19892828 Free PMC article.
OrthoDisease: tracking disease gene orthologs across 100 species.
Forslund K, Schreiber F, Thanintorn N, Sonnhammer EL. Forslund K, et al. Among authors: sonnhammer el. Brief Bioinform. 2011 Sep;12(5):463-73. doi: 10.1093/bib/bbr024. Epub 2011 May 12. Brief Bioinform. 2011. PMID: 21565935 Review.
Hieranoid: hierarchical orthology inference.
Schreiber F, Sonnhammer ELL. Schreiber F, et al. J Mol Biol. 2013 Jun 12;425(11):2072-2081. doi: 10.1016/j.jmb.2013.02.018. Epub 2013 Feb 26. J Mol Biol. 2013. PMID: 23485417
FunCoup 3.0: database of genome-wide functional coupling networks.
Schmitt T, Ogris C, Sonnhammer EL. Schmitt T, et al. Among authors: sonnhammer el. Nucleic Acids Res. 2014 Jan;42(Database issue):D380-8. doi: 10.1093/nar/gkt984. Epub 2013 Oct 31. Nucleic Acids Res. 2014. PMID: 24185702 Free PMC article.
FunCoup 4: new species, data, and visualization.
Ogris C, Guala D, Sonnhammer ELL. Ogris C, et al. Nucleic Acids Res. 2018 Jan 4;46(D1):D601-D607. doi: 10.1093/nar/gkx1138. Nucleic Acids Res. 2018. PMID: 29165593 Free PMC article.
155 results