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Metagenomic analysis of the stool microbiome in patients receiving allogeneic stem cell transplantation: loss of diversity is associated with use of systemic antibiotics and more pronounced in gastrointestinal graft-versus-host disease.
Holler E, Butzhammer P, Schmid K, Hundsrucker C, Koestler J, Peter K, Zhu W, Sporrer D, Hehlgans T, Kreutz M, Holler B, Wolff D, Edinger M, Andreesen R, Levine JE, Ferrara JL, Gessner A, Spang R, Oefner PJ. Holler E, et al. Among authors: spang r. Biol Blood Marrow Transplant. 2014 May;20(5):640-5. doi: 10.1016/j.bbmt.2014.01.030. Epub 2014 Jan 31. Biol Blood Marrow Transplant. 2014. PMID: 24492144 Free PMC article.
Reference point insensitive molecular data analysis.
Altenbuchinger M, Rehberg T, Zacharias HU, Stämmler F, Dettmer K, Weber D, Hiergeist A, Gessner A, Holler E, Oefner PJ, Spang R. Altenbuchinger M, et al. Among authors: spang r. Bioinformatics. 2017 Jan 15;33(2):219-226. doi: 10.1093/bioinformatics/btw598. Epub 2016 Sep 15. Bioinformatics. 2017. PMID: 27634945
Moreover, we describe a novel coordinate descent based algorithm to fit zero-sum elastic nets. AVAILABILITY AND IMPLEMENTATION: The R-package "zeroSum" can be downloaded at https://github.com/rehbergT/zeroSum Moreover, we provide all R-scripts and data used to produ …
Moreover, we describe a novel coordinate descent based algorithm to fit zero-sum elastic nets. AVAILABILITY AND IMPLEMENTATION: The R …
Loss-Function Learning for Digital Tissue Deconvolution.
Görtler F, Schön M, Simeth J, Solbrig S, Wettig T, Oefner PJ, Spang R, Altenbuchinger M. Görtler F, et al. Among authors: spang r. J Comput Biol. 2020 Mar;27(3):342-355. doi: 10.1089/cmb.2019.0462. Epub 2020 Jan 29. J Comput Biol. 2020. PMID: 31995401
DTD: An R Package for Digital Tissue Deconvolution.
Schön M, Simeth J, Heinrich P, Görtler F, Solbrig S, Wettig T, Oefner PJ, Altenbuchinger M, Spang R. Schön M, et al. Among authors: spang r. J Comput Biol. 2020 Mar;27(3):386-389. doi: 10.1089/cmb.2019.0469. Epub 2020 Jan 29. J Comput Biol. 2020. PMID: 31995409 Free PMC article.
164 results