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Page 1
Genomic mechanisms of climate adaptation in polyploid bioenergy switchgrass.
Lovell JT, MacQueen AH, Mamidi S, Bonnette J, Jenkins J, Napier JD, Sreedasyam A, Healey A, Session A, Shu S, Barry K, Bonos S, Boston L, Daum C, Deshpande S, Ewing A, Grabowski PP, Haque T, Harrison M, Jiang J, Kudrna D, Lipzen A, Pendergast TH 4th, Plott C, Qi P, Saski CA, Shakirov EV, Sims D, Sharma M, Sharma R, Stewart A, Singan VR, Tang Y, Thibivillier S, Webber J, Weng X, Williams M, Wu GA, Yoshinaga Y, Zane M, Zhang L, Zhang J, Behrman KD, Boe AR, Fay PA, Fritschi FB, Jastrow JD, Lloyd-Reilley J, Martínez-Reyna JM, Matamala R, Mitchell RB, Rouquette FM Jr, Ronald P, Saha M, Tobias CM, Udvardi M, Wing RA, Wu Y, Bartley LE, Casler M, Devos KM, Lowry DB, Rokhsar DS, Grimwood J, Juenger TE, Schmutz J. Lovell JT, et al. Among authors: sreedasyam a. Nature. 2021 Feb;590(7846):438-444. doi: 10.1038/s41586-020-03127-1. Epub 2021 Jan 27. Nature. 2021. PMID: 33505029 Free PMC article.
Genome-wide analysis of lectin receptor-like kinases in Populus.
Yang Y, Labbé J, Muchero W, Yang X, Jawdy SS, Kennedy M, Johnson J, Sreedasyam A, Schmutz J, Tuskan GA, Chen JG. Yang Y, et al. Among authors: sreedasyam a. BMC Genomics. 2016 Sep 1;17(1):699. doi: 10.1186/s12864-016-3026-2. BMC Genomics. 2016. PMID: 27580945 Free PMC article.
Flaxseed Consumption Inhibits Chemically Induced Lung Tumorigenesis and Modulates Expression of Phase II Enzymes and Inflammatory Cytokines in A/J Mice.
Chikara S, Mamidi S, Sreedasyam A, Chittem K, Pietrofesa R, Zuppa A, Moorthy G, Dyer N, Christofidou-Solomidou M, Reindl KM. Chikara S, et al. Among authors: sreedasyam a. Cancer Prev Res (Phila). 2018 Jan;11(1):27-37. doi: 10.1158/1940-6207.CAPR-17-0119. Epub 2017 Oct 26. Cancer Prev Res (Phila). 2018. PMID: 29074535 Free PMC article.
The Sorghum bicolor reference genome: improved assembly, gene annotations, a transcriptome atlas, and signatures of genome organization.
McCormick RF, Truong SK, Sreedasyam A, Jenkins J, Shu S, Sims D, Kennedy M, Amirebrahimi M, Weers BD, McKinley B, Mattison A, Morishige DT, Grimwood J, Schmutz J, Mullet JE. McCormick RF, et al. Among authors: sreedasyam a. Plant J. 2018 Jan;93(2):338-354. doi: 10.1111/tpj.13781. Epub 2017 Dec 28. Plant J. 2018. PMID: 29161754 Free article.
The Physcomitrella patens gene atlas project: large-scale RNA-seq based expression data.
Perroud PF, Haas FB, Hiss M, Ullrich KK, Alboresi A, Amirebrahimi M, Barry K, Bassi R, Bonhomme S, Chen H, Coates JC, Fujita T, Guyon-Debast A, Lang D, Lin J, Lipzen A, Nogué F, Oliver MJ, Ponce de León I, Quatrano RS, Rameau C, Reiss B, Reski R, Ricca M, Saidi Y, Sun N, Szövényi P, Sreedasyam A, Grimwood J, Stacey G, Schmutz J, Rensing SA. Perroud PF, et al. Among authors: sreedasyam a. Plant J. 2018 Jul;95(1):168-182. doi: 10.1111/tpj.13940. Epub 2018 Jun 7. Plant J. 2018. PMID: 29681058 Free article.
Revealing the transcriptomic complexity of switchgrass by PacBio long-read sequencing.
Zuo C, Blow M, Sreedasyam A, Kuo RC, Ramamoorthy GK, Torres-Jerez I, Li G, Wang M, Dilworth D, Barry K, Udvardi M, Schmutz J, Tang Y, Xu Y. Zuo C, et al. Among authors: sreedasyam a. Biotechnol Biofuels. 2018 Jun 20;11:170. doi: 10.1186/s13068-018-1167-z. eCollection 2018. Biotechnol Biofuels. 2018. PMID: 29951114 Free PMC article.
A mosaic monoploid reference sequence for the highly complex genome of sugarcane.
Garsmeur O, Droc G, Antonise R, Grimwood J, Potier B, Aitken K, Jenkins J, Martin G, Charron C, Hervouet C, Costet L, Yahiaoui N, Healey A, Sims D, Cherukuri Y, Sreedasyam A, Kilian A, Chan A, Van Sluys MA, Swaminathan K, Town C, Bergès H, Simmons B, Glaszmann JC, van der Vossen E, Henry R, Schmutz J, D'Hont A. Garsmeur O, et al. Among authors: sreedasyam a. Nat Commun. 2018 Jul 6;9(1):2638. doi: 10.1038/s41467-018-05051-5. Nat Commun. 2018. PMID: 29980662 Free PMC article.
The genomic landscape of molecular responses to natural drought stress in Panicum hallii.
Lovell JT, Jenkins J, Lowry DB, Mamidi S, Sreedasyam A, Weng X, Barry K, Bonnette J, Campitelli B, Daum C, Gordon SP, Gould BA, Khasanova A, Lipzen A, MacQueen A, Palacio-Mejía JD, Plott C, Shakirov EV, Shu S, Yoshinaga Y, Zane M, Kudrna D, Talag JD, Rokhsar D, Grimwood J, Schmutz J, Juenger TE. Lovell JT, et al. Among authors: sreedasyam a. Nat Commun. 2018 Dec 6;9(1):5213. doi: 10.1038/s41467-018-07669-x. Nat Commun. 2018. PMID: 30523281 Free PMC article.
43 results