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Cultivation of a thermophilic ammonia oxidizing archaeon synthesizing crenarchaeol.
de la Torre JR, Walker CB, Ingalls AE, Könneke M, Stahl DA. de la Torre JR, et al. Environ Microbiol. 2008 Mar;10(3):810-8. doi: 10.1111/j.1462-2920.2007.01506.x. Epub 2008 Jan 19. Environ Microbiol. 2008. PMID: 18205821
Ammonia oxidation kinetics determine niche separation of nitrifying Archaea and Bacteria.
Martens-Habbena W, Berube PM, Urakawa H, de la Torre JR, Stahl DA. Martens-Habbena W, et al. Nature. 2009 Oct 15;461(7266):976-9. doi: 10.1038/nature08465. Epub 2009 Sep 30. Nature. 2009. PMID: 19794413
Transcriptional response of the archaeal ammonia oxidizer Nitrosopumilus maritimus to low and environmentally relevant ammonia concentrations.
Nakagawa T, Stahl DA. Nakagawa T, et al. Appl Environ Microbiol. 2013 Nov;79(22):6911-6. doi: 10.1128/AEM.02028-13. Epub 2013 Aug 30. Appl Environ Microbiol. 2013. PMID: 23995944 Free PMC article.
Differential photoinhibition of bacterial and archaeal ammonia oxidation.
Merbt SN, Stahl DA, Casamayor EO, Martí E, Nicol GW, Prosser JI. Merbt SN, et al. FEMS Microbiol Lett. 2012 Feb;327(1):41-6. doi: 10.1111/j.1574-6968.2011.02457.x. Epub 2011 Dec 2. FEMS Microbiol Lett. 2012. PMID: 22093004
Marine ammonia-oxidizing archaeal isolates display obligate mixotrophy and wide ecotypic variation.
Qin W, Amin SA, Martens-Habbena W, Walker CB, Urakawa H, Devol AH, Ingalls AE, Moffett JW, Armbrust EV, Stahl DA. Qin W, et al. Proc Natl Acad Sci U S A. 2014 Aug 26;111(34):12504-9. doi: 10.1073/pnas.1324115111. Epub 2014 Aug 11. Proc Natl Acad Sci U S A. 2014. PMID: 25114236 Free PMC article.
Accumulation of NO2 -cobalamin in nutrient-stressed ammonia-oxidizing archaea and in the oxygen deficient zone of the eastern tropical North Pacific.
Heal KR, Qin W, Amin SA, Devol AH, Moffett JW, Armbrust EV, Stahl DA, Ingalls AE. Heal KR, et al. Environ Microbiol Rep. 2018 Aug;10(4):453-457. doi: 10.1111/1758-2229.12664. Epub 2018 Aug 8. Environ Microbiol Rep. 2018. PMID: 30022612
Influence of oxygen availability on the activities of ammonia-oxidizing archaea.
Qin W, Meinhardt KA, Moffett JW, Devol AH, Virginia Armbrust E, Ingalls AE, Stahl DA. Qin W, et al. Environ Microbiol Rep. 2017 Jun;9(3):250-256. doi: 10.1111/1758-2229.12525. Epub 2017 Mar 13. Environ Microbiol Rep. 2017. PMID: 28211189
Confounding effects of oxygen and temperature on the TEX86 signature of marine Thaumarchaeota.
Qin W, Carlson LT, Armbrust EV, Devol AH, Moffett JW, Stahl DA, Ingalls AE. Qin W, et al. Proc Natl Acad Sci U S A. 2015 Sep 1;112(35):10979-84. doi: 10.1073/pnas.1501568112. Epub 2015 Aug 17. Proc Natl Acad Sci U S A. 2015. PMID: 26283385 Free PMC article.
Ammonia-oxidizing archaea use the most energy-efficient aerobic pathway for CO2 fixation.
Könneke M, Schubert DM, Brown PC, Hügler M, Standfest S, Schwander T, Schada von Borzyskowski L, Erb TJ, Stahl DA, Berg IA. Könneke M, et al. Proc Natl Acad Sci U S A. 2014 Jun 3;111(22):8239-44. doi: 10.1073/pnas.1402028111. Epub 2014 May 19. Proc Natl Acad Sci U S A. 2014. PMID: 24843170 Free PMC article.
Ammonia oxidation kinetics and temperature sensitivity of a natural marine community dominated by Archaea.
Horak RE, Qin W, Schauer AJ, Armbrust EV, Ingalls AE, Moffett JW, Stahl DA, Devol AH. Horak RE, et al. ISME J. 2013 Oct;7(10):2023-33. doi: 10.1038/ismej.2013.75. Epub 2013 May 9. ISME J. 2013. PMID: 23657360 Free PMC article.
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