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Table representation of search results timeline featuring number of search results per year.

Year Number of Results
2001 1
2002 3
2003 2
2004 2
2005 5
2006 11
2007 6
2008 5
2009 3
2010 11
2011 4
2012 4
2013 13
2014 8
2015 8
2016 7
2017 13
2018 17
2019 24
2020 27
2021 0
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162 results
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Page 1
The Fungal Tree of Life: from Molecular Systematics to Genome-Scale Phylogenies.
Spatafora JW, Aime MC, Grigoriev IV, Martin F, Stajich JE, Blackwell M. Spatafora JW, et al. Among authors: stajich je. Microbiol Spectr. 2017 Sep;5(5). doi: 10.1128/microbiolspec.FUNK-0053-2016. Microbiol Spectr. 2017. PMID: 28917057 Free article. Review.
Threats Posed by the Fungal Kingdom to Humans, Wildlife, and Agriculture.
Fisher MC, Gurr SJ, Cuomo CA, Blehert DS, Jin H, Stukenbrock EH, Stajich JE, Kahmann R, Boone C, Denning DW, Gow NAR, Klein BS, Kronstad JW, Sheppard DC, Taylor JW, Wright GD, Heitman J, Casadevall A, Cowen LE. Fisher MC, et al. Among authors: stajich je. mBio. 2020 May 5;11(3):e00449-20. doi: 10.1128/mBio.00449-20. mBio. 2020. PMID: 32371596 Free PMC article. Review.
Fungal biofilm morphology impacts hypoxia fitness and disease progression.
Kowalski CH, Kerkaert JD, Liu KW, Bond MC, Hartmann R, Nadell CD, Stajich JE, Cramer RA. Kowalski CH, et al. Among authors: stajich je. Nat Microbiol. 2019 Dec;4(12):2430-2441. doi: 10.1038/s41564-019-0558-7. Epub 2019 Sep 23. Nat Microbiol. 2019. PMID: 31548684 Free PMC article.
Widespread adenine N6-methylation of active genes in fungi.
Mondo SJ, Dannebaum RO, Kuo RC, Louie KB, Bewick AJ, LaButti K, Haridas S, Kuo A, Salamov A, Ahrendt SR, Lau R, Bowen BP, Lipzen A, Sullivan W, Andreopoulos BB, Clum A, Lindquist E, Daum C, Northen TR, Kunde-Ramamoorthy G, Schmitz RJ, Gryganskyi A, Culley D, Magnuson J, James TY, O'Malley MA, Stajich JE, Spatafora JW, Visel A, Grigoriev IV. Mondo SJ, et al. Among authors: stajich je. Nat Genet. 2017 Jun;49(6):964-968. doi: 10.1038/ng.3859. Epub 2017 May 8. Nat Genet. 2017. PMID: 28481340 Free article.
A phylum-level phylogenetic classification of zygomycete fungi based on genome-scale data.
Spatafora JW, Chang Y, Benny GL, Lazarus K, Smith ME, Berbee ML, Bonito G, Corradi N, Grigoriev I, Gryganskyi A, James TY, O'Donnell K, Roberson RW, Taylor TN, Uehling J, Vilgalys R, White MM, Stajich JE. Spatafora JW, et al. Among authors: stajich je. Mycologia. 2016 Sep;108(5):1028-1046. doi: 10.3852/16-042. Mycologia. 2016. PMID: 27738200 Free PMC article.
Members of the Euwallacea fornicatus species complex exhibit promiscuous mutualism with ambrosia fungi in Taiwan.
Carrillo JD, Rugman-Jones PF, Husein D, Stajich JE, Kasson MT, Carrillo D, Stouthamer R, Eskalen A. Carrillo JD, et al. Among authors: stajich je. Fungal Genet Biol. 2019 Dec;133:103269. doi: 10.1016/j.fgb.2019.103269. Epub 2019 Sep 10. Fungal Genet Biol. 2019. PMID: 31518652
Insights from the genome of the biotrophic fungal plant pathogen Ustilago maydis.
Kämper J, Kahmann R, Bölker M, Ma LJ, Brefort T, Saville BJ, Banuett F, Kronstad JW, Gold SE, Müller O, Perlin MH, Wösten HA, de Vries R, Ruiz-Herrera J, Reynaga-Peña CG, Snetselaar K, McCann M, Pérez-Martín J, Feldbrügge M, Basse CW, Steinberg G, Ibeas JI, Holloman W, Guzman P, Farman M, Stajich JE, Sentandreu R, González-Prieto JM, Kennell JC, Molina L, Schirawski J, Mendoza-Mendoza A, Greilinger D, Münch K, Rössel N, Scherer M, Vranes M, Ladendorf O, Vincon V, Fuchs U, Sandrock B, Meng S, Ho EC, Cahill MJ, Boyce KJ, Klose J, Klosterman SJ, Deelstra HJ, Ortiz-Castellanos L, Li W, Sanchez-Alonso P, Schreier PH, Häuser-Hahn I, Vaupel M, Koopmann E, Friedrich G, Voss H, Schlüter T, Margolis J, Platt D, Swimmer C, Gnirke A, Chen F, Vysotskaia V, Mannhaupt G, Güldener U, Münsterkötter M, Haase D, Oesterheld M, Mewes HW, Mauceli EW, DeCaprio D, Wade CM, Butler J, Young S, Jaffe DB, Calvo S, Nusbaum C, Galagan J, Birren BW. Kämper J, et al. Among authors: stajich je. Nature. 2006 Nov 2;444(7115):97-101. doi: 10.1038/nature05248. Nature. 2006. PMID: 17080091
FGMP: assessing fungal genome completeness.
Cissé OH, Stajich JE. Cissé OH, et al. Among authors: stajich je. BMC Bioinformatics. 2019 Apr 15;20(1):184. doi: 10.1186/s12859-019-2782-9. BMC Bioinformatics. 2019. PMID: 30987585 Free PMC article.
Future-Proofing Your Microbiology Resource Announcements Genome Assembly for Reproducibility and Clarity.
Baltrus DA, Cuomo CA, Dennehy JJ, Dunning Hotopp JC, Maresca JA, Newton ILG, Rasko DA, Rokas A, Roux S, Stajich JE. Baltrus DA, et al. Among authors: stajich je. Microbiol Resour Announc. 2019 Sep 5;8(36):e00954-19. doi: 10.1128/MRA.00954-19. Microbiol Resour Announc. 2019. PMID: 31488541 Free PMC article.
Analysis of the genome and transcriptome of Cryptococcus neoformans var. grubii reveals complex RNA expression and microevolution leading to virulence attenuation.
Janbon G, Ormerod KL, Paulet D, Byrnes EJ 3rd, Yadav V, Chatterjee G, Mullapudi N, Hon CC, Billmyre RB, Brunel F, Bahn YS, Chen W, Chen Y, Chow EW, Coppée JY, Floyd-Averette A, Gaillardin C, Gerik KJ, Goldberg J, Gonzalez-Hilarion S, Gujja S, Hamlin JL, Hsueh YP, Ianiri G, Jones S, Kodira CD, Kozubowski L, Lam W, Marra M, Mesner LD, Mieczkowski PA, Moyrand F, Nielsen K, Proux C, Rossignol T, Schein JE, Sun S, Wollschlaeger C, Wood IA, Zeng Q, Neuvéglise C, Newlon CS, Perfect JR, Lodge JK, Idnurm A, Stajich JE, Kronstad JW, Sanyal K, Heitman J, Fraser JA, Cuomo CA, Dietrich FS. Janbon G, et al. Among authors: stajich je. PLoS Genet. 2014 Apr 17;10(4):e1004261. doi: 10.1371/journal.pgen.1004261. eCollection 2014 Apr. PLoS Genet. 2014. PMID: 24743168 Free PMC article.
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