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Toward sequencing cotton (Gossypium) genomes.
Chen ZJ, Scheffler BE, Dennis E, Triplett BA, Zhang T, Guo W, Chen X, Stelly DM, Rabinowicz PD, Town CD, Arioli T, Brubaker C, Cantrell RG, Lacape JM, Ulloa M, Chee P, Gingle AR, Haigler CH, Percy R, Saha S, Wilkins T, Wright RJ, Van Deynze A, Zhu Y, Yu S, Abdurakhmonov I, Katageri I, Kumar PA, Mehboob-Ur-Rahman, Zafar Y, Yu JZ, Kohel RJ, Wendel JF, Paterson AH. Chen ZJ, et al. Among authors: Stelly DM. Plant Physiol. 2007 Dec;145(4):1303-10. doi: 10.1104/pp.107.107672. Plant Physiol. 2007. PMID: 18056866 Free PMC article. No abstract available.
Uniqueness of the Gossypium mustelinum genome revealed by GISH and 45S rDNA FISH.
Wu Q, Liu F, Li S, Song G, Wang C, Zhang X, Wang Y, Stelly D, Wang K. Wu Q, et al. Among authors: Stelly D. J Integr Plant Biol. 2013 Jul;55(7):654-62. doi: 10.1111/jipb.12084. J Integr Plant Biol. 2013. PMID: 23758934 Free PMC article.
Diversity analysis of cotton (Gossypium hirsutum L.) germplasm using the CottonSNP63K Array.
Hinze LL, Hulse-Kemp AM, Wilson IW, Zhu QH, Llewellyn DJ, Taylor JM, Spriggs A, Fang DD, Ulloa M, Burke JJ, Giband M, Lacape JM, Van Deynze A, Udall JA, Scheffler JA, Hague S, Wendel JF, Pepper AE, Frelichowski J, Lawley CT, Jones DC, Percy RG, Stelly DM. Hinze LL, et al. Among authors: Stelly DM. BMC Plant Biol. 2017 Feb 3;17(1):37. doi: 10.1186/s12870-017-0981-y. BMC Plant Biol. 2017. PMID: 28158969 Free PMC article.
Sub genome anchored physical frameworks of the allotetraploid Upland cotton (Gossypium hirsutum L.) genome, and an approach toward reference-grade assemblies of polyploids.
Saski CA, Scheffler BE, Hulse-Kemp AM, Liu B, Song Q, Ando A, Stelly DM, Scheffler JA, Grimwood J, Jones DC, Peterson DG, Schmutz J, Chen ZJ. Saski CA, et al. Among authors: Stelly DM. Sci Rep. 2017 Nov 10;7(1):15274. doi: 10.1038/s41598-017-14885-w. Sci Rep. 2017. PMID: 29127298 Free PMC article.
Sampling nucleotide diversity in cotton.
Van Deynze A, Stoffel K, Lee M, Wilkins TA, Kozik A, Cantrell RG, Yu JZ, Kohel RJ, Stelly DM. Van Deynze A, et al. Among authors: Stelly DM. BMC Plant Biol. 2009 Oct 20;9:125. doi: 10.1186/1471-2229-9-125. BMC Plant Biol. 2009. PMID: 19840401 Free PMC article.
Clustering, haplotype diversity and locations of MIC-3: a unique root-specific defense-related gene family in Upland cotton (Gossypium hirsutum L.).
Buriev ZT, Saha S, Abdurakhmonov IY, Jenkins JN, Abdukarimov A, Scheffler BE, Stelly DM. Buriev ZT, et al. Among authors: Stelly DM. Theor Appl Genet. 2010 Feb;120(3):587-606. doi: 10.1007/s00122-009-1178-z. Epub 2009 Oct 28. Theor Appl Genet. 2010. PMID: 19862497
Repeated polyploidization of Gossypium genomes and the evolution of spinnable cotton fibres.
Paterson AH, Wendel JF, Gundlach H, Guo H, Jenkins J, Jin D, Llewellyn D, Showmaker KC, Shu S, Udall J, Yoo MJ, Byers R, Chen W, Doron-Faigenboim A, Duke MV, Gong L, Grimwood J, Grover C, Grupp K, Hu G, Lee TH, Li J, Lin L, Liu T, Marler BS, Page JT, Roberts AW, Romanel E, Sanders WS, Szadkowski E, Tan X, Tang H, Xu C, Wang J, Wang Z, Zhang D, Zhang L, Ashrafi H, Bedon F, Bowers JE, Brubaker CL, Chee PW, Das S, Gingle AR, Haigler CH, Harker D, Hoffmann LV, Hovav R, Jones DC, Lemke C, Mansoor S, ur Rahman M, Rainville LN, Rambani A, Reddy UK, Rong JK, Saranga Y, Scheffler BE, Scheffler JA, Stelly DM, Triplett BA, Van Deynze A, Vaslin MF, Waghmare VN, Walford SA, Wright RJ, Zaki EA, Zhang T, Dennis ES, Mayer KF, Peterson DG, Rokhsar DS, Wang X, Schmutz J. Paterson AH, et al. Among authors: Stelly DM. Nature. 2012 Dec 20;492(7429):423-7. doi: 10.1038/nature11798. Nature. 2012. PMID: 23257886
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