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Nuclear DNA phylogeny of the squirrels (Mammalia: Rodentia) and the evolution of arboreality from c-myc and RAG1.
Steppan SJ, Storz BL, Hoffmann RS. Steppan SJ, et al. Mol Phylogenet Evol. 2004 Mar;30(3):703-19. doi: 10.1016/S1055-7903(03)00204-5. Mol Phylogenet Evol. 2004. PMID: 15012949
Molecular phylogeny of the marmots (Rodentia: Sciuridae): tests of evolutionary and biogeographic hypotheses.
Steppan SJ, Akhverdyan MR, Lyapunova EA, Fraser DG, Vorontsov NN, Hoffmann RS, Braun MJ. Steppan SJ, et al. Syst Biol. 1999 Dec;48(4):715-34. doi: 10.1080/106351599259988. Syst Biol. 1999. PMID: 12066297
Phylogeny and divergence-date estimates of rapid radiations in muroid rodents based on multiple nuclear genes.
Steppan S, Adkins R, Anderson J. Steppan S, et al. Syst Biol. 2004 Aug;53(4):533-53. doi: 10.1080/10635150490468701. Syst Biol. 2004. PMID: 15371245
Multigene phylogeny of the Old World mice, Murinae, reveals distinct geographic lineages and the declining utility of mitochondrial genes compared to nuclear genes.
Steppan SJ, Adkins RM, Spinks PQ, Hale C. Steppan SJ, et al. Mol Phylogenet Evol. 2005 Nov;37(2):370-88. doi: 10.1016/j.ympev.2005.04.016. Epub 2005 Jun 21. Mol Phylogenet Evol. 2005. PMID: 15975830
Pliocene colonization and adaptive radiations in Australia and New Guinea (Sahul): multilocus systematics of the old endemic rodents (Muroidea: Murinae).
Rowe KC, Reno ML, Richmond DM, Adkins RM, Steppan SJ. Rowe KC, et al. Among authors: steppan sj. Mol Phylogenet Evol. 2008 Apr;47(1):84-101. doi: 10.1016/j.ympev.2008.01.001. Epub 2008 Jan 11. Mol Phylogenet Evol. 2008. PMID: 18313945
A supermatrix-based molecular phylogeny of the family Drosophilidae.
van der Linde K, Houle D, Spicer GS, Steppan SJ. van der Linde K, et al. Among authors: steppan sj. Genet Res (Camb). 2010 Feb;92(1):25-38. doi: 10.1017/S001667231000008X. Genet Res (Camb). 2010. PMID: 20433773
Ecological opportunity and incumbency in the diversification of repeated continental colonizations by muroid rodents.
Schenk JJ, Rowe KC, Steppan SJ. Schenk JJ, et al. Among authors: steppan sj. Syst Biol. 2013 Nov;62(6):837-64. doi: 10.1093/sysbio/syt050. Epub 2013 Aug 6. Syst Biol. 2013. PMID: 23925508
Molecular phylogenetics and historical biogeography amid shifting continents in the cockles and giant clams (Bivalvia: Cardiidae).
Herrera ND, Ter Poorten JJ, Bieler R, Mikkelsen PM, Strong EE, Jablonski D, Steppan SJ. Herrera ND, et al. Among authors: steppan sj. Mol Phylogenet Evol. 2015 Dec;93:94-106. doi: 10.1016/j.ympev.2015.07.013. Epub 2015 Jul 30. Mol Phylogenet Evol. 2015. PMID: 26234273
Emergence and evolution of Zfp36l3.
Gingerich TJ, Stumpo DJ, Lai WS, Randall TA, Steppan SJ, Blackshear PJ. Gingerich TJ, et al. Among authors: steppan sj. Mol Phylogenet Evol. 2016 Jan;94(Pt B):518-530. doi: 10.1016/j.ympev.2015.10.016. Epub 2015 Oct 19. Mol Phylogenet Evol. 2016. PMID: 26493225 Free PMC article.
Muroid rodent phylogenetics: 900-species tree reveals increasing diversification rates.
Steppan SJ, Schenk JJ. Steppan SJ, et al. PLoS One. 2017 Aug 16;12(8):e0183070. doi: 10.1371/journal.pone.0183070. eCollection 2017. PLoS One. 2017. PMID: 28813483 Free PMC article.
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