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miRWalk--database: prediction of possible miRNA binding sites by "walking" the genes of three genomes.
Dweep H, Sticht C, Pandey P, Gretz N. Dweep H, et al. Among authors: sticht c. J Biomed Inform. 2011 Oct;44(5):839-47. doi: 10.1016/j.jbi.2011.05.002. Epub 2011 May 14. J Biomed Inform. 2011. PMID: 21605702
Increased number of microRNA target sites in genes encoded in CNV regions. Evidence for an evolutionary genomic interaction.
Felekkis K, Voskarides K, Dweep H, Sticht C, Gretz N, Deltas C. Felekkis K, et al. Among authors: sticht c. Mol Biol Evol. 2011 Sep;28(9):2421-4. doi: 10.1093/molbev/msr078. Epub 2011 Mar 25. Mol Biol Evol. 2011. PMID: 21441354
Parallel analysis of mRNA and microRNA microarray profiles to explore functional regulatory patterns in polycystic kidney disease: using PKD/Mhm rat model.
Dweep H, Sticht C, Kharkar A, Pandey P, Gretz N. Dweep H, et al. Among authors: sticht c. PLoS One. 2013;8(1):e53780. doi: 10.1371/journal.pone.0053780. Epub 2013 Jan 10. PLoS One. 2013. PMID: 23326503 Free PMC article.
Yes-associated protein up-regulates Jagged-1 and activates the Notch pathway in human hepatocellular carcinoma.
Tschaharganeh DF, Chen X, Latzko P, Malz M, Gaida MM, Felix K, Ladu S, Singer S, Pinna F, Gretz N, Sticht C, Tomasi ML, Delogu S, Evert M, Fan B, Ribback S, Jiang L, Brozzetti S, Bergmann F, Dombrowski F, Schirmacher P, Calvisi DF, Breuhahn K. Tschaharganeh DF, et al. Among authors: sticht c. Gastroenterology. 2013 Jun;144(7):1530-1542.e12. doi: 10.1053/j.gastro.2013.02.009. Epub 2013 Feb 16. Gastroenterology. 2013. PMID: 23419361 Free PMC article.
In-Silico Algorithms for the Screening of Possible microRNA Binding Sites and Their Interactions.
Dweep H, Sticht C, Gretz N. Dweep H, et al. Among authors: sticht c. Curr Genomics. 2013 Apr;14(2):127-36. doi: 10.2174/1389202911314020005. Curr Genomics. 2013. PMID: 24082822 Free PMC article.
Overexpression of far upstream element (FUSE) binding protein (FBP)-interacting repressor (FIR) supports growth of hepatocellular carcinoma.
Malz M, Bovet M, Samarin J, Rabenhorst U, Sticht C, Bissinger M, Roessler S, Bermejo JL, Renner M, Calvisi DF, Singer S, Ganzinger M, Weber A, Gretz N, Zörnig M, Schirmacher P, Breuhahn K. Malz M, et al. Among authors: sticht c. Hepatology. 2014 Oct;60(4):1241-50. doi: 10.1002/hep.27218. Epub 2014 Jul 31. Hepatology. 2014. PMID: 24824848
Angiopoietin-1 is regulated by miR-204 and contributes to corneal neovascularization in KLEIP-deficient mice.
Kather JN, Friedrich J, Woik N, Sticht C, Gretz N, Hammes HP, Kroll J. Kather JN, et al. Among authors: sticht c. Invest Ophthalmol Vis Sci. 2014 Jun 10;55(7):4295-303. doi: 10.1167/iovs.13-13619. Invest Ophthalmol Vis Sci. 2014. PMID: 24917145
miRWalk database for miRNA-target interactions.
Dweep H, Gretz N, Sticht C. Dweep H, et al. Among authors: sticht c. Methods Mol Biol. 2014;1182:289-305. doi: 10.1007/978-1-4939-1062-5_25. Methods Mol Biol. 2014. PMID: 25055920
Alteration of mRNA and microRNA expression profiles in rat muscular type vasculature in early postnatal development.
Gaynullina D, Dweep H, Gloe T, Tarasova OS, Sticht C, Gretz N, Schubert R. Gaynullina D, et al. Among authors: sticht c. Sci Rep. 2015 Jun 15;5:11106. doi: 10.1038/srep11106. Sci Rep. 2015. PMID: 26073182 Free PMC article.
Inhibition of 13-cis retinoic acid-induced gene expression of reactive-resistance genes by thalidomide in glioblastoma tumours in vivo.
Milanovic D, Sticht C, Röhrich M, Maier P, Grosu AL, Herskind C. Milanovic D, et al. Among authors: sticht c. Oncotarget. 2015 Oct 6;6(30):28938-48. doi: 10.18632/oncotarget.4727. Oncotarget. 2015. PMID: 26362268 Free PMC article.
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