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Mining genome databases to identify and understand new gene regulatory systems.
Stormo GD, Tan K. Stormo GD, et al. Curr Opin Microbiol. 2002 Apr;5(2):149-53. doi: 10.1016/s1369-5274(02)00309-0. Curr Opin Microbiol. 2002. PMID: 11934610 Review.
Computational identification of the Spo0A-phosphate regulon that is essential for the cellular differentiation and development in Gram-positive spore-forming bacteria.
Liu J, Tan K, Stormo GD. Liu J, et al. Among authors: stormo gd. Nucleic Acids Res. 2003 Dec 1;31(23):6891-903. doi: 10.1093/nar/gkg879. Nucleic Acids Res. 2003. PMID: 14627822 Free PMC article.
Modeling regulatory networks with weight matrices.
Weaver DC, Workman CT, Stormo GD. Weaver DC, et al. Among authors: stormo gd. Pac Symp Biocomput. 1999:112-23. doi: 10.1142/9789814447300_0011. Pac Symp Biocomput. 1999. PMID: 10380190
Identification of coordinated gene expression and regulatory sequences.
Stormo GD. Stormo GD. Pac Symp Biocomput. 2000;(12):416-7. Pac Symp Biocomput. 2000. PMID: 10902189 No abstract available.
Identifying muscle regulatory elements and genes in the nematode Caenorhabditis elegans.
Guhathakurta D, Schriefer LA, Hresko MC, Waterston RH, Stormo GD. Guhathakurta D, et al. Among authors: stormo gd. Pac Symp Biocomput. 2002:425-36. doi: 10.1142/9789812799623_0040. Pac Symp Biocomput. 2002. PMID: 11928496
Selection of optimal DNA oligos for gene expression arrays.
Li F, Stormo GD. Li F, et al. Among authors: stormo gd. Bioinformatics. 2001 Nov;17(11):1067-76. doi: 10.1093/bioinformatics/17.11.1067. Bioinformatics. 2001. PMID: 11724738
Identifying target sites for cooperatively binding factors.
GuhaThakurta D, Stormo GD. GuhaThakurta D, et al. Among authors: stormo gd. Bioinformatics. 2001 Jul;17(7):608-21. doi: 10.1093/bioinformatics/17.7.608. Bioinformatics. 2001. PMID: 11448879
A comparative genomics approach to prediction of new members of regulons.
Tan K, Moreno-Hagelsieb G, Collado-Vides J, Stormo GD. Tan K, et al. Among authors: stormo gd. Genome Res. 2001 Apr;11(4):566-84. doi: 10.1101/gr.149301. Genome Res. 2001. PMID: 11282972 Free PMC article.
Injury in the era of genomics.
Cobb JP, Brownstein BH, Watson MA, Shannon WD, Laramie JM, Qiu Y, Stormo GD, Morrissey JJ, Buchman TG, Karl IE, Hotchkiss RS. Cobb JP, et al. Among authors: stormo gd. Shock. 2001 Mar;15(3):165-70. doi: 10.1097/00024382-200115030-00001. Shock. 2001. PMID: 11236897 Review.
Gene-finding approaches for eukaryotes.
Stormo GD. Stormo GD. Genome Res. 2000 Apr;10(4):394-7. doi: 10.1101/gr.10.4.394. Genome Res. 2000. PMID: 10779479 Review. No abstract available.
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