Stumpf MP - Search Results

1

StochSens--Matlab package for sensitivity analysis of stochastic chemical systems.

Komorowski M, Zurauskiene J, Stumpf MP. Komorowski M, et al. Among authors: stumpf mp. Bioinformatics. 2012 Mar 1;28(5):731-3. doi: 10.1093/bioinformatics/btr714. Bioinformatics. 2012. PMID: 22378710

2

Network motifs: structure does not determine function.

Ingram PJ, Stumpf MP, Stark J. Ingram PJ, et al. Among authors: stumpf mp. BMC Genomics. 2006 May 5;7:108. doi: 10.1186/1471-2164-7-108. BMC Genomics. 2006. PMID: 16677373 Free PMC article.

3

Complex networks and simple models in biology.

de Silva E, Stumpf MP. de Silva E, et al. Among authors: stumpf mp. J R Soc Interface. 2005 Dec 22;2(5):419-30. doi: 10.1098/rsif.2005.0067. J R Soc Interface. 2005. PMID: 16849202 Free PMC article. Review.

4

SNPSTR: a database of compound microsatellite-SNP markers.

Agrafioti I, Stumpf MP. Agrafioti I, et al. Among authors: stumpf mp. Nucleic Acids Res. 2007 Jan;35(Database issue):D71-5. doi: 10.1093/nar/gkl806. Nucleic Acids Res. 2007. PMID: 17202172 Free PMC article.

5

Using likelihood-free inference to compare evolutionary dynamics of the protein networks of H. pylori and P. falciparum.

Ratmann O, Jørgensen O, Hinkley T, Stumpf M, Richardson S, Wiuf C. Ratmann O, et al. PLoS Comput Biol. 2007 Nov;3(11):e230. doi: 10.1371/journal.pcbi.0030230. Epub 2007 Oct 9. PLoS Comput Biol. 2007. PMID: 18052538 Free PMC article.

6

Generating confidence intervals on biological networks.

Thorne T, Stumpf MP. Thorne T, et al. Among authors: stumpf mp. BMC Bioinformatics. 2007 Nov 30;8:467. doi: 10.1186/1471-2105-8-467. BMC Bioinformatics. 2007. PMID: 18053130 Free PMC article.

7

Parameter inference for biochemical systems that undergo a Hopf bifurcation.

Kirk PD, Toni T, Stumpf MP. Kirk PD, et al. Among authors: stumpf mp. Biophys J. 2008 Jul;95(2):540-9. doi: 10.1529/biophysj.107.126086. Epub 2008 May 2. Biophys J. 2008. PMID: 18456830 Free PMC article.

8

Statistical interpretation of the interplay between noise and chaos in the stochastic logistic map.

Erguler K, Stumpf MP. Erguler K, et al. Among authors: stumpf mp. Math Biosci. 2008 Nov;216(1):90-9. doi: 10.1016/j.mbs.2008.08.012. Math Biosci. 2008. PMID: 18805431

9

Nonidentifiability of the source of intrinsic noise in gene expression from single-burst data.

Ingram PJ, Stumpf MP, Stark J. Ingram PJ, et al. Among authors: stumpf mp. PLoS Comput Biol. 2008 Oct;4(10):e1000192. doi: 10.1371/journal.pcbi.1000192. Epub 2008 Oct 10. PLoS Comput Biol. 2008. PMID: 18846201 Free PMC article.

10

Approximate Bayesian computation scheme for parameter inference and model selection in dynamical systems.

Toni T, Welch D, Strelkowa N, Ipsen A, Stumpf MP. Toni T, et al. Among authors: stumpf mp. J R Soc Interface. 2009 Feb 6;6(31):187-202. doi: 10.1098/rsif.2008.0172. J R Soc Interface. 2009. PMID: 19205079 Free PMC article.

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