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PSLDoc: Protein subcellular localization prediction based on gapped-dipeptides and probabilistic latent semantic analysis.
Chang JM, Su EC, Lo A, Chiu HS, Sung TY, Hsu WL. Chang JM, et al. Among authors: su ec. Proteins. 2008 Aug;72(2):693-710. doi: 10.1002/prot.21944. Proteins. 2008. PMID: 18260102
Protein subcellular localization prediction based on compartment-specific features and structure conservation.
Su EC, Chiu HS, Lo A, Hwang JK, Sung TY, Hsu WL. Su EC, et al. BMC Bioinformatics. 2007 Sep 8;8:330. doi: 10.1186/1471-2105-8-330. BMC Bioinformatics. 2007. PMID: 17825110 Free PMC article.
Predicting RNA-binding sites of proteins using support vector machines and evolutionary information.
Cheng CW, Su EC, Hwang JK, Sung TY, Hsu WL. Cheng CW, et al. Among authors: su ec. BMC Bioinformatics. 2008 Dec 12;9 Suppl 12(Suppl 12):S6. doi: 10.1186/1471-2105-9-S12-S6. BMC Bioinformatics. 2008. PMID: 19091029 Free PMC article.
Prediction of nuclear proteins using nuclear translocation signals proposed by probabilistic latent semantic indexing.
Su EC, Chang JM, Cheng CW, Sung TY, Hsu WL. Su EC, et al. BMC Bioinformatics. 2012;13 Suppl 17(Suppl 17):S13. doi: 10.1186/1471-2105-13-S17-S13. Epub 2012 Dec 13. BMC Bioinformatics. 2012. PMID: 23282098 Free PMC article.
Prediction of B-cell epitopes using evolutionary information and propensity scales.
Lin SY, Cheng CW, Su EC. Lin SY, et al. Among authors: su ec. BMC Bioinformatics. 2013;14 Suppl 2(Suppl 2):S10. doi: 10.1186/1471-2105-14-s2-s10. BMC Bioinformatics. 2013. PMID: 23484214 Free PMC article.
Efficient and interpretable prediction of protein functional classes by correspondence analysis and compact set relations.
Chang JM, Taly JF, Erb I, Sung TY, Hsu WL, Tang CY, Notredame C, Su EC. Chang JM, et al. Among authors: su ec. PLoS One. 2013 Oct 11;8(10):e75542. doi: 10.1371/journal.pone.0075542. eCollection 2013. PLoS One. 2013. PMID: 24146760 Free PMC article.
Prediction of HIV-1 protease cleavage site using a combination of sequence, structural, and physicochemical features.
Singh O, Su EC. Singh O, et al. Among authors: su ec. BMC Bioinformatics. 2016 Dec 23;17(Suppl 17):478. doi: 10.1186/s12859-016-1337-6. BMC Bioinformatics. 2016. PMID: 28155640 Free PMC article.
NTTMUNSW BioC modules for recognizing and normalizing species and gene/protein mentions.
Dai HJ, Singh O, Jonnagaddala J, Su EC. Dai HJ, et al. Among authors: su ec. Database (Oxford). 2016 Jul 27;2016:baw111. doi: 10.1093/database/baw111. Print 2016. Database (Oxford). 2016. PMID: 27465130 Free PMC article.
ChemiRs: a web application for microRNAs and chemicals.
Su EC, Chen YS, Tien YC, Liu J, Ho BC, Yu SL, Singh S. Su EC, et al. BMC Bioinformatics. 2016 Apr 18;17:167. doi: 10.1186/s12859-016-1002-0. BMC Bioinformatics. 2016. PMID: 27091357 Free PMC article.
Predicting diabetic retinopathy and identifying interpretable biomedical features using machine learning algorithms.
Tsao HY, Chan PY, Su EC. Tsao HY, et al. Among authors: su ec. BMC Bioinformatics. 2018 Aug 13;19(Suppl 9):283. doi: 10.1186/s12859-018-2277-0. BMC Bioinformatics. 2018. PMID: 30367589 Free PMC article.
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