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PSLDoc: Protein subcellular localization prediction based on gapped-dipeptides and probabilistic latent semantic analysis.
Chang JM, Su EC, Lo A, Chiu HS, Sung TY, Hsu WL. Chang JM, et al. Among authors: sung ty. Proteins. 2008 Aug;72(2):693-710. doi: 10.1002/prot.21944. Proteins. 2008. PMID: 18260102
HYPROSP: a hybrid protein secondary structure prediction algorithm--a knowledge-based approach.
Wu KP, Lin HN, Chang JM, Sung TY, Hsu WL. Wu KP, et al. Among authors: sung ty. Nucleic Acids Res. 2004 Sep 24;32(17):5059-65. doi: 10.1093/nar/gkh836. Print 2004. Nucleic Acids Res. 2004. PMID: 15448186 Free PMC article.
HYPROSP II--a knowledge-based hybrid method for protein secondary structure prediction based on local prediction confidence.
Lin HN, Chang JM, Wu KP, Sung TY, Hsu WL. Lin HN, et al. Among authors: sung ty. Bioinformatics. 2005 Aug 1;21(15):3227-33. doi: 10.1093/bioinformatics/bti524. Epub 2005 Jun 2. Bioinformatics. 2005. PMID: 15932901
GANA--a genetic algorithm for NMR backbone resonance assignment.
Lin HN, Wu KP, Chang JM, Sung TY, Hsu WL. Lin HN, et al. Among authors: sung ty. Nucleic Acids Res. 2005 Aug 10;33(14):4593-601. doi: 10.1093/nar/gki768. Print 2005. Nucleic Acids Res. 2005. PMID: 16093550 Free PMC article.
A new similarity measure among protein sequences.
Wu KP, Lin HN, Sung TY, Hsu WL. Wu KP, et al. Among authors: sung ty. Proc IEEE Comput Soc Bioinform Conf. 2003;2:347-52. Proc IEEE Comput Soc Bioinform Conf. 2003. PMID: 16452810
Various criteria in the evaluation of biomedical named entity recognition.
Tsai RT, Wu SH, Chou WC, Lin YC, He D, Hsiang J, Sung TY, Hsu WL. Tsai RT, et al. Among authors: sung ty. BMC Bioinformatics. 2006 Feb 24;7:92. doi: 10.1186/1471-2105-7-92. BMC Bioinformatics. 2006. PMID: 16504116 Free PMC article.
RIBRA--an error-tolerant algorithm for the NMR backbone assignment problem.
Wu KP, Chang JM, Chen JB, Chang CF, Wu WJ, Huang TH, Sung TY, Hsu WL. Wu KP, et al. Among authors: sung ty. J Comput Biol. 2006 Mar;13(2):229-44. doi: 10.1089/cmb.2006.13.229. J Comput Biol. 2006. PMID: 16597237
Multi-Q: a fully automated tool for multiplexed protein quantitation.
Lin WT, Hung WN, Yian YH, Wu KP, Han CL, Chen YR, Chen YJ, Sung TY, Hsu WL. Lin WT, et al. Among authors: sung ty. J Proteome Res. 2006 Sep;5(9):2328-38. doi: 10.1021/pr060132c. J Proteome Res. 2006. PMID: 16944945
HYPLOSP: a knowledge-based approach to protein local structure prediction.
Chen CT, Lin HN, Sung TY, Hsu WL. Chen CT, et al. Among authors: sung ty. J Bioinform Comput Biol. 2006 Dec;4(6):1287-307. doi: 10.1142/s0219720006002466. J Bioinform Comput Biol. 2006. PMID: 17245815
NERBio: using selected word conjunctions, term normalization, and global patterns to improve biomedical named entity recognition.
Tsai RT, Sung CL, Dai HJ, Hung HC, Sung TY, Hsu WL. Tsai RT, et al. Among authors: sung cl, sung ty. BMC Bioinformatics. 2006 Dec 18;7 Suppl 5(Suppl 5):S11. doi: 10.1186/1471-2105-7-S5-S11. BMC Bioinformatics. 2006. PMID: 17254295 Free PMC article.
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