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Diversity of ammonia monooxygenase operon in autotrophic ammonia-oxidizing bacteria.
Norton JM, Alzerreca JJ, Suwa Y, Klotz MG. Norton JM, et al. Arch Microbiol. 2002 Feb;177(2):139-49. doi: 10.1007/s00203-001-0369-z. Epub 2001 Dec 6. Arch Microbiol. 2002. PMID: 11807563
Responses of community structure of amoA-encoding archaea and ammonia-oxidizing bacteria in ammonia biofilter with rockwool mixtures to the gradual increases in ammonium and nitrate.
Yasuda T, Waki M, Kuroda K, Hanajima D, Fukumoto Y, Yamagishi T, Suwa Y, Suzuki K. Yasuda T, et al. J Appl Microbiol. 2013 Mar;114(3):746-61. doi: 10.1111/jam.12091. Epub 2012 Dec 27. J Appl Microbiol. 2013. PMID: 23198809
Complete genome of Nitrosospira briensis C-128, an ammonia-oxidizing bacterium from agricultural soil.
Rice MC, Norton JM, Valois F, Bollmann A, Bottomley PJ, Klotz MG, Laanbroek HJ, Suwa Y, Stein LY, Sayavedra-Soto L, Woyke T, Shapiro N, Goodwin LA, Huntemann M, Clum A, Pillay M, Kyrpides N, Varghese N, Mikhailova N, Markowitz V, Palaniappan K, Ivanova N, Stamatis D, Reddy TB, Ngan CY, Daum C. Rice MC, et al. Stand Genomic Sci. 2016 Jul 28;11:46. doi: 10.1186/s40793-016-0168-4. eCollection 2016. Stand Genomic Sci. 2016. PMID: 27471578 Free PMC article.
A Physiological and Genomic Comparison of Nitrosomonas Cluster 6a and 7 Ammonia-Oxidizing Bacteria.
Sedlacek CJ, McGowan B, Suwa Y, Sayavedra-Soto L, Laanbroek HJ, Stein LY, Norton JM, Klotz MG, Bollmann A. Sedlacek CJ, et al. Microb Ecol. 2019 Nov;78(4):985-994. doi: 10.1007/s00248-019-01378-8. Epub 2019 Apr 11. Microb Ecol. 2019. PMID: 30976841
High abundance of ammonia-oxidizing archaea in acidified subtropical forest soils in southern China after long-term N deposition.
Isobe K, Koba K, Suwa Y, Ikutani J, Fang Y, Yoh M, Mo J, Otsuka S, Senoo K. Isobe K, et al. FEMS Microbiol Ecol. 2012 Apr;80(1):193-203. doi: 10.1111/j.1574-6941.2011.01294.x. Epub 2012 Jan 20. FEMS Microbiol Ecol. 2012. PMID: 22224831
Characterization of a chromosomally encoded 2,4-dichlorophenoxyacetic acid/alpha-ketoglutarate dioxygenase from Burkholderia sp. strain RASC.
Suwa Y, Wright AD, Fukimori F, Nummy KA, Hausinger RP, Holben WE, Forney LJ. Suwa Y, et al. Appl Environ Microbiol. 1996 Jul;62(7):2464-9. doi: 10.1128/AEM.62.7.2464-2469.1996. Appl Environ Microbiol. 1996. PMID: 8779585 Free PMC article.
Methyloceanibacter caenitepidi gen. nov., sp. nov., a facultatively methylotrophic bacterium isolated from marine sediments near a hydrothermal vent.
Takeuchi M, Katayama T, Yamagishi T, Hanada S, Tamaki H, Kamagata Y, Oshima K, Hattori M, Marumo K, Nedachi M, Maeda H, Suwa Y, Sakata S. Takeuchi M, et al. Int J Syst Evol Microbiol. 2014 Feb;64(Pt 2):462-468. doi: 10.1099/ijs.0.053397-0. Epub 2013 Oct 4. Int J Syst Evol Microbiol. 2014. PMID: 24096357
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