Skip to main page content
U.S. flag

An official website of the United States government

Dot gov

The .gov means it’s official.
Federal government websites often end in .gov or .mil. Before sharing sensitive information, make sure you’re on a federal government site.

Https

The site is secure.
The https:// ensures that you are connecting to the official website and that any information you provide is encrypted and transmitted securely.

Access keys NCBI Homepage MyNCBI Homepage Main Content Main Navigation

Search Page

Filters

My NCBI Filters

Text availability

Article attribute

Article type

Publication date

Search Results

28 results

Filters applied: . Clear all
Results are displayed in a computed author sort order. The Results By Year timeline is not available.
Page 1
Outcome of the First wwPDB/CCDC/D3R Ligand Validation Workshop.
Adams PD, Aertgeerts K, Bauer C, Bell JA, Berman HM, Bhat TN, Blaney JM, Bolton E, Bricogne G, Brown D, Burley SK, Case DA, Clark KL, Darden T, Emsley P, Feher VA, Feng Z, Groom CR, Harris SF, Hendle J, Holder T, Joachimiak A, Kleywegt GJ, Krojer T, Marcotrigiano J, Mark AE, Markley JL, Miller M, Minor W, Montelione GT, Murshudov G, Nakagawa A, Nakamura H, Nicholls A, Nicklaus M, Nolte RT, Padyana AK, Peishoff CE, Pieniazek S, Read RJ, Shao C, Sheriff S, Smart O, Soisson S, Spurlino J, Stouch T, Svobodova R, Tempel W, Terwilliger TC, Tronrud D, Velankar S, Ward SC, Warren GL, Westbrook JD, Williams P, Yang H, Young J. Adams PD, et al. Among authors: svobodova r. Structure. 2016 Apr 5;24(4):502-508. doi: 10.1016/j.str.2016.02.017. Structure. 2016. PMID: 27050687 Free PMC article.
High-performance macromolecular data delivery and visualization for the web.
Sehnal D, Svobodová R, Berka K, Rose AS, Burley SK, Velankar S, Koča J. Sehnal D, et al. Among authors: svobodova r. Acta Crystallogr D Struct Biol. 2020 Dec 1;76(Pt 12):1167-1173. doi: 10.1107/S2059798320014515. Epub 2020 Nov 26. Acta Crystallogr D Struct Biol. 2020. PMID: 33263322 Free PMC article.
CATH: increased structural coverage of functional space.
Sillitoe I, Bordin N, Dawson N, Waman VP, Ashford P, Scholes HM, Pang CSM, Woodridge L, Rauer C, Sen N, Abbasian M, Le Cornu S, Lam SD, Berka K, Varekova IH, Svobodova R, Lees J, Orengo CA. Sillitoe I, et al. Among authors: svobodova r. Nucleic Acids Res. 2021 Jan 8;49(D1):D266-D273. doi: 10.1093/nar/gkaa1079. Nucleic Acids Res. 2021. PMID: 33237325 Free PMC article.
2DProts: database of family-wide protein secondary structure diagrams.
Hutařová Vařeková I, Hutař J, Midlik A, Horský V, Hladká E, Svobodová R, Berka K. Hutařová Vařeková I, et al. Among authors: svobodova r. Bioinformatics. 2021 Dec 7;37(23):4599-4601. doi: 10.1093/bioinformatics/btab505. Bioinformatics. 2021. PMID: 34244700 Free PMC article.
OverProt: secondary structure consensus for protein families.
Midlik A, Hutařová Vařeková I, Hutař J, Chareshneu A, Berka K, Svobodová R. Midlik A, et al. Among authors: svobodova r. Bioinformatics. 2022 Jul 11;38(14):3648-3650. doi: 10.1093/bioinformatics/btac384. Bioinformatics. 2022. PMID: 35674374
28 results