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CANTATAdb: A Collection of Plant Long Non-Coding RNAs.
Szcześniak MW, Rosikiewicz W, Makałowska I. Szcześniak MW, et al. Plant Cell Physiol. 2016 Jan;57(1):e8. doi: 10.1093/pcp/pcv201. Epub 2015 Dec 12. Plant Cell Physiol. 2016. PMID: 26657895 Free PMC article.
mirEX: a platform for comparative exploration of plant pri-miRNA expression data.
Bielewicz D, Dolata J, Zielezinski A, Alaba S, Szarzynska B, Szczesniak MW, Jarmolowski A, Szweykowska-Kulinska Z, Karlowski WM. Bielewicz D, et al. Among authors: szczesniak mw. Nucleic Acids Res. 2012 Jan;40(Database issue):D191-7. doi: 10.1093/nar/gkr878. Epub 2011 Oct 19. Nucleic Acids Res. 2012. PMID: 22013167 Free PMC article.
[MicroRNA databases].
Szcześniak MW, Owczarkowska E, Gapski J, Makałowska I. Szcześniak MW, et al. Postepy Biochem. 2012;58(1):91-9. Postepy Biochem. 2012. PMID: 23214133 Review. Polish.
miRNEST 2.0: a database of plant and animal microRNAs.
Szczesniak MW, Makalowska I. Szczesniak MW, et al. Nucleic Acids Res. 2014 Jan;42(Database issue):D74-7. doi: 10.1093/nar/gkt1156. Epub 2013 Nov 15. Nucleic Acids Res. 2014. PMID: 24243848 Free PMC article.
A survey of best practices for RNA-seq data analysis.
Conesa A, Madrigal P, Tarazona S, Gomez-Cabrero D, Cervera A, McPherson A, Szcześniak MW, Gaffney DJ, Elo LL, Zhang X, Mortazavi A. Conesa A, et al. Among authors: szczesniak mw. Genome Biol. 2016 Jan 26;17:13. doi: 10.1186/s13059-016-0881-8. Genome Biol. 2016. PMID: 26813401 Free PMC article. Review.
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