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Determining the semantic similarities among Gene Ontology terms.
Taha K. Taha K. IEEE J Biomed Health Inform. 2013 May;17(3):512-25. doi: 10.1109/jbhi.2013.2248742. IEEE J Biomed Health Inform. 2013. PMID: 24592450
Predicting protein function from biomedical text.
Taha K, Yoo PD. Taha K, et al. Conf Proc IEEE Eng Med Biol Soc. 2015;2015:3275-8. doi: 10.1109/EMBC.2015.7319091. Conf Proc IEEE Eng Med Biol Soc. 2015. PMID: 26736991
Determining Semantically Related Significant Genes.
Taha K. Taha K. IEEE/ACM Trans Comput Biol Bioinform. 2014 Nov-Dec;11(6):1119-30. doi: 10.1109/TCBB.2014.2344668. IEEE/ACM Trans Comput Biol Bioinform. 2014. PMID: 26357049
Applying Monte Carlo Simulation to Biomedical Literature to Approximate Genetic Network.
Al-Dalky R, Taha K, Al Homouz D, Qasaimeh M. Al-Dalky R, et al. IEEE/ACM Trans Comput Biol Bioinform. 2016 May-Jun;13(3):494-504. doi: 10.1109/TCBB.2015.2481399. Epub 2015 Sep 23. IEEE/ACM Trans Comput Biol Bioinform. 2016. PMID: 26415184
iPFPi: A System for Improving Protein Function Prediction through Cumulative Iterations.
Taha K, Yoo PD, Alzaabi M. Taha K, et al. IEEE/ACM Trans Comput Biol Bioinform. 2015 Jul-Aug;12(4):825-36. doi: 10.1109/TCBB.2014.2344681. IEEE/ACM Trans Comput Biol Bioinform. 2015. PMID: 26357323
Predicting protein functions by applying predicate logic to biomedical literature.
Taha K, Iraqi Y, Al Aamri A. Taha K, et al. BMC Bioinformatics. 2019 Feb 8;20(1):71. doi: 10.1186/s12859-019-2594-y. BMC Bioinformatics. 2019. PMID: 30736739 Free PMC article.
Analyzing a co-occurrence gene-interaction network to identify disease-gene association.
Al-Aamri A, Taha K, Al-Hammadi Y, Maalouf M, Homouz D. Al-Aamri A, et al. BMC Bioinformatics. 2019 Feb 8;20(1):70. doi: 10.1186/s12859-019-2634-7. BMC Bioinformatics. 2019. PMID: 30736752 Free PMC article.
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