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Draft genome sequencing and comparative analysis of Aspergillus sojae NBRC4239.
Sato A, Oshima K, Noguchi H, Ogawa M, Takahashi T, Oguma T, Koyama Y, Itoh T, Hattori M, Hanya Y. Sato A, et al. DNA Res. 2011 Jun;18(3):165-76. doi: 10.1093/dnares/dsr009. DNA Res. 2011. PMID: 21659486 Free PMC article.
Transcriptional regulation of genes on the non-syntenic blocks of Aspergillus oryzae and its functional relationship to solid-state cultivation.
Tamano K, Sano M, Yamane N, Terabayashi Y, Toda T, Sunagawa M, Koike H, Hatamoto O, Umitsuki G, Takahashi T, Koyama Y, Asai R, Abe K, Machida M. Tamano K, et al. Fungal Genet Biol. 2008 Feb;45(2):139-51. doi: 10.1016/j.fgb.2007.09.005. Epub 2007 Sep 25. Fungal Genet Biol. 2008. PMID: 17967552
Understanding nonaflatoxigenicity of Aspergillus sojae: a windfall of aflatoxin biosynthesis research.
Chang PK, Matsushima K, Takahashi T, Yu J, Abe K, Bhatnagar D, Yuan GF, Koyama Y, Cleveland TE. Chang PK, et al. Appl Microbiol Biotechnol. 2007 Oct;76(5):977-84. doi: 10.1007/s00253-007-1116-4. Epub 2007 Jul 31. Appl Microbiol Biotechnol. 2007. PMID: 17665189 Review.
Generation of large chromosomal deletions in koji molds Aspergillus oryzae and Aspergillus sojae via a loop-out recombination.
Takahashi T, Jin FJ, Sunagawa M, Machida M, Koyama Y. Takahashi T, et al. Appl Environ Microbiol. 2008 Dec;74(24):7684-93. doi: 10.1128/AEM.00692-08. Epub 2008 Oct 24. Appl Environ Microbiol. 2008. PMID: 18952883 Free PMC article.
Analysis of the functions of recombination-related genes in the generation of large chromosomal deletions by loop-out recombination in Aspergillus oryzae.
Takahashi T, Ogawa M, Koyama Y. Takahashi T, et al. Eukaryot Cell. 2012 Apr;11(4):507-17. doi: 10.1128/EC.05208-11. Epub 2012 Jan 27. Eukaryot Cell. 2012. PMID: 22286092 Free PMC article.
SclR, a basic helix-loop-helix transcription factor, regulates hyphal morphology and promotes sclerotial formation in Aspergillus oryzae.
Jin FJ, Takahashi T, Matsushima K, Hara S, Shinohara Y, Maruyama J, Kitamoto K, Koyama Y. Jin FJ, et al. Eukaryot Cell. 2011 Jul;10(7):945-55. doi: 10.1128/EC.00013-11. Epub 2011 May 6. Eukaryot Cell. 2011. PMID: 21551246 Free PMC article.
A trial of minimization of chromosome 7 in Aspergillus oryzae by multiple chromosomal deletions.
Jin FJ, Takahashi T, Utsushikawa M, Furukido T, Nishida M, Ogawa M, Tokuoka M, Koyama Y. Jin FJ, et al. Mol Genet Genomics. 2010 Jan;283(1):1-12. doi: 10.1007/s00438-009-0494-y. Epub 2009 Oct 24. Mol Genet Genomics. 2010. PMID: 19855999
Genetic analysis of conidiation regulatory pathways in koji-mold Aspergillus oryzae.
Ogawa M, Tokuoka M, Jin FJ, Takahashi T, Koyama Y. Ogawa M, et al. Fungal Genet Biol. 2010 Jan;47(1):10-8. doi: 10.1016/j.fgb.2009.10.004. Fungal Genet Biol. 2010. PMID: 19850144
Nonhomologous end-joining deficiency allows large chromosomal deletions to be produced by replacement-type recombination in Aspergillus oryzae.
Takahashi T, Jin FJ, Koyama Y. Takahashi T, et al. Fungal Genet Biol. 2009 Nov;46(11):815-24. doi: 10.1016/j.fgb.2009.07.009. Epub 2009 Aug 3. Fungal Genet Biol. 2009. PMID: 19654050
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