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9,392 results
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Probabilistic inference of biochemical reactions in microbial communities from metagenomic sequences.
Jiao D, Ye Y, Tang H. Jiao D, et al. Among authors: tang h. PLoS Comput Biol. 2013;9(3):e1002981. doi: 10.1371/journal.pcbi.1002981. Epub 2013 Mar 21. PLoS Comput Biol. 2013. PMID: 23555216 Free PMC article.
Advancement in protein inference from shotgun proteomics using peptide detectability.
Alves P, Arnold RJ, Novotny MV, Radivojac P, Reilly JP, Tang H. Alves P, et al. Among authors: tang h. Pac Symp Biocomput. 2007:409-20. Pac Symp Biocomput. 2007. PMID: 17990506
An ORFome assembly approach to metagenomics sequences analysis.
Ye Y, Tang H. Ye Y, et al. Among authors: tang h. J Bioinform Comput Biol. 2009 Jun;7(3):455-71. doi: 10.1142/s0219720009004151. J Bioinform Comput Biol. 2009. PMID: 19507285 Free PMC article.
An ORFome assembly approach to metagenomics sequences analysis.
Ye Y, Tang H. Ye Y, et al. Among authors: tang h. Comput Syst Bioinformatics Conf. 2008;7:3-13. Comput Syst Bioinformatics Conf. 2008. PMID: 19642264
A bayesian approach to protein inference problem in shotgun proteomics.
Li YF, Arnold RJ, Li Y, Radivojac P, Sheng Q, Tang H. Li YF, et al. Among authors: tang h. J Comput Biol. 2009 Aug;16(8):1183-93. doi: 10.1089/cmb.2009.0018. J Comput Biol. 2009. PMID: 19645593 Free PMC article.
MGEScan-non-LTR: computational identification and classification of autonomous non-LTR retrotransposons in eukaryotic genomes.
Rho M, Tang H. Rho M, et al. Among authors: tang h. Nucleic Acids Res. 2009 Nov;37(21):e143. doi: 10.1093/nar/gkp752. Nucleic Acids Res. 2009. PMID: 19762481 Free PMC article.
FragGeneScan: predicting genes in short and error-prone reads.
Rho M, Tang H, Ye Y. Rho M, et al. Among authors: tang h. Nucleic Acids Res. 2010 Nov;38(20):e191. doi: 10.1093/nar/gkq747. Epub 2010 Aug 30. Nucleic Acids Res. 2010. PMID: 20805240 Free PMC article.
Comparing bacterial communities inferred from 16S rRNA gene sequencing and shotgun metagenomics.
Shah N, Tang H, Doak TG, Ye Y. Shah N, et al. Among authors: tang h. Pac Symp Biocomput. 2011:165-76. doi: 10.1142/9789814335058_0018. Pac Symp Biocomput. 2011. PMID: 21121044
The ecoresponsive genome of Daphnia pulex.
Colbourne JK, Pfrender ME, Gilbert D, Thomas WK, Tucker A, Oakley TH, Tokishita S, Aerts A, Arnold GJ, Basu MK, Bauer DJ, Cáceres CE, Carmel L, Casola C, Choi JH, Detter JC, Dong Q, Dusheyko S, Eads BD, Fröhlich T, Geiler-Samerotte KA, Gerlach D, Hatcher P, Jogdeo S, Krijgsveld J, Kriventseva EV, Kültz D, Laforsch C, Lindquist E, Lopez J, Manak JR, Muller J, Pangilinan J, Patwardhan RP, Pitluck S, Pritham EJ, Rechtsteiner A, Rho M, Rogozin IB, Sakarya O, Salamov A, Schaack S, Shapiro H, Shiga Y, Skalitzky C, Smith Z, Souvorov A, Sung W, Tang Z, Tsuchiya D, Tu H, Vos H, Wang M, Wolf YI, Yamagata H, Yamada T, Ye Y, Shaw JR, Andrews J, Crease TJ, Tang H, Lucas SM, Robertson HM, Bork P, Koonin EV, Zdobnov EM, Grigoriev IV, Lynch M, Boore JL. Colbourne JK, et al. Among authors: tang h, tang z. Science. 2011 Feb 4;331(6017):555-61. doi: 10.1126/science.1197761. Science. 2011. PMID: 21292972 Free PMC article.
RAPSearch: a fast protein similarity search tool for short reads.
Ye Y, Choi JH, Tang H. Ye Y, et al. Among authors: tang h. BMC Bioinformatics. 2011 May 15;12:159. doi: 10.1186/1471-2105-12-159. BMC Bioinformatics. 2011. PMID: 21575167 Free PMC article.
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