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LysNDeNovo: an algorithm enabling de novo sequencing of Lys-N generated peptides fragmented by electron transfer dissociation.
van Breukelen B, Georgiou A, Drugan MM, Taouatas N, Mohammed S, Heck AJ. van Breukelen B, et al. Among authors: taouatas n. Proteomics. 2010 Mar;10(6):1196-201. doi: 10.1002/pmic.200900405. Proteomics. 2010. PMID: 20077410
Proteome-wide protein concentrations in the human heart.
Aye TT, Scholten A, Taouatas N, Varro A, Van Veen TA, Vos MA, Heck AJ. Aye TT, et al. Among authors: taouatas n. Mol Biosyst. 2010 Oct;6(10):1917-27. doi: 10.1039/c004495d. Epub 2010 Jul 1. Mol Biosyst. 2010. PMID: 20596566
Straightforward and de novo peptide sequencing by MALDI-MS/MS using a Lys-N metalloendopeptidase.
Boersema PJ, Taouatas N, Altelaar AF, Gouw JW, Ross PL, Pappin DJ, Heck AJ, Mohammed S. Boersema PJ, et al. Among authors: taouatas n. Mol Cell Proteomics. 2009 Apr;8(4):650-60. doi: 10.1074/mcp.M800249-MCP200. Epub 2008 Nov 29. Mol Cell Proteomics. 2009. PMID: 19043101 Free PMC article.
Straightforward ladder sequencing of peptides using a Lys-N metalloendopeptidase.
Taouatas N, Drugan MM, Heck AJ, Mohammed S. Taouatas N, et al. Nat Methods. 2008 May;5(5):405-7. doi: 10.1038/nmeth.1204. Epub 2008 Apr 20. Nat Methods. 2008. PMID: 18425140
We introduce a method for sequencing peptides by mass spectrometry using a metalloendopeptidase that cleaves proteins at the amino side of lysine (Lys-N). When analyzed by electron transfer dissociation (ETD)-based mass spectrometric sequencing, Lys-N-digested pepti …
We introduce a method for sequencing peptides by mass spectrometry using a metalloendopeptidase that cleaves proteins at the amino side of l …
Strong cation exchange-based fractionation of Lys-N-generated peptides facilitates the targeted analysis of post-translational modifications.
Taouatas N, Altelaar AF, Drugan MM, Helbig AO, Mohammed S, Heck AJ. Taouatas N, et al. Mol Cell Proteomics. 2009 Jan;8(1):190-200. doi: 10.1074/mcp.M800285-MCP200. Epub 2008 Sep 29. Mol Cell Proteomics. 2009. PMID: 18824475
Here, we describe the sequential use of strong cation exchange and reversed phase liquid chromatography in the separation of peptides generated by a relatively little explored metallo-endopeptidase with Lys-N cleavage specificity. ...We argue that the well resolved separat …
Here, we describe the sequential use of strong cation exchange and reversed phase liquid chromatography in the separation of peptides genera …
Protease bias in absolute protein quantitation.
Peng M, Taouatas N, Cappadona S, van Breukelen B, Mohammed S, Scholten A, Heck AJ. Peng M, et al. Among authors: taouatas n. Nat Methods. 2012 May 30;9(6):524-5. doi: 10.1038/nmeth.2031. Nat Methods. 2012. PMID: 22669647 No abstract available.
The kinase TNIK is an essential activator of Wnt target genes.
Mahmoudi T, Li VS, Ng SS, Taouatas N, Vries RG, Mohammed S, Heck AJ, Clevers H. Mahmoudi T, et al. Among authors: taouatas n. EMBO J. 2009 Nov 4;28(21):3329-40. doi: 10.1038/emboj.2009.285. Epub 2009 Oct 8. EMBO J. 2009. PMID: 19816403 Free PMC article.
The leukemia-associated Mllt10/Af10-Dot1l are Tcf4/β-catenin coactivators essential for intestinal homeostasis.
Mahmoudi T, Boj SF, Hatzis P, Li VS, Taouatas N, Vries RG, Teunissen H, Begthel H, Korving J, Mohammed S, Heck AJ, Clevers H. Mahmoudi T, et al. Among authors: taouatas n. PLoS Biol. 2010 Nov 16;8(11):e1000539. doi: 10.1371/journal.pbio.1000539. PLoS Biol. 2010. PMID: 21103407 Free PMC article.
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