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Year Number of Results
2009 1
2010 1
2011 1
2012 1
2014 3
2015 2
2016 5
2017 2
2018 5
2019 3
2020 4
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28 results
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Page 1
A survey of best practices for RNA-seq data analysis.
Conesa A, Madrigal P, Tarazona S, Gomez-Cabrero D, Cervera A, McPherson A, Szcześniak MW, Gaffney DJ, Elo LL, Zhang X, Mortazavi A. Conesa A, et al. Among authors: tarazona s. Genome Biol. 2016 Jan 26;17:13. doi: 10.1186/s13059-016-0881-8. Genome Biol. 2016. PMID: 26813401 Free PMC article. Review.
PaintOmics 3: a web resource for the pathway analysis and visualization of multi-omics data.
Hernández-de-Diego R, Tarazona S, Martínez-Mira C, Balzano-Nogueira L, Furió-Tarí P, Pappas GJ Jr, Conesa A. Hernández-de-Diego R, et al. Among authors: tarazona s. Nucleic Acids Res. 2018 Jul 2;46(W1):W503-W509. doi: 10.1093/nar/gky466. Nucleic Acids Res. 2018. PMID: 29800320 Free PMC article.
STATegra, a comprehensive multi-omics dataset of B-cell differentiation in mouse.
Gomez-Cabrero D, Tarazona S, Ferreirós-Vidal I, Ramirez RN, Company C, Schmidt A, Reijmers T, Paul VVS, Marabita F, Rodríguez-Ubreva J, Garcia-Gomez A, Carroll T, Cooper L, Liang Z, Dharmalingam G, van der Kloet F, Harms AC, Balzano-Nogueira L, Lagani V, Tsamardinos I, Lappe M, Maier D, Westerhuis JA, Hankemeier T, Imhof A, Ballestar E, Mortazavi A, Merkenschlager M, Tegner J, Conesa A. Gomez-Cabrero D, et al. Among authors: tarazona s. Sci Data. 2019 Oct 31;6(1):256. doi: 10.1038/s41597-019-0202-7. Sci Data. 2019. PMID: 31672995 Free PMC article.
Differential expression in RNA-seq: a matter of depth.
Tarazona S, García-Alcalde F, Dopazo J, Ferrer A, Conesa A. Tarazona S, et al. Genome Res. 2011 Dec;21(12):2213-23. doi: 10.1101/gr.124321.111. Epub 2011 Sep 8. Genome Res. 2011. PMID: 21903743 Free PMC article.
Erratum to: A survey of best practices for RNA-seq data analysis.
Conesa A, Madrigal P, Tarazona S, Gomez-Cabrero D, Cervera A, McPherson A, Szcześniak MW, Gaffney DJ, Elo LL, Zhang X, Mortazavi A. Conesa A, et al. Among authors: tarazona s. Genome Biol. 2016 Aug 26;17(1):181. doi: 10.1186/s13059-016-1047-4. Genome Biol. 2016. PMID: 27565134 Free PMC article. No abstract available.
Feedforward regulation of Myc coordinates lineage-specific with housekeeping gene expression during B cell progenitor cell differentiation.
Ferreirós-Vidal I, Carroll T, Zhang T, Lagani V, Ramirez RN, Ing-Simmons E, Gómez-Valadés AG, Cooper L, Liang Z, Papoutsoglou G, Dharmalingam G, Guo Y, Tarazona S, Fernandes SJ, Noori P, Silberberg G, Fisher AG, Tsamardinos I, Mortazavi A, Lenhard B, Conesa A, Tegner J, Merkenschlager M, Gomez-Cabrero D. Ferreirós-Vidal I, et al. Among authors: tarazona s. PLoS Biol. 2019 Apr 12;17(4):e2006506. doi: 10.1371/journal.pbio.2006506. eCollection 2019 Apr. PLoS Biol. 2019. PMID: 30978178 Free PMC article.
A Multiomics Study To Unravel the Effects of Developmental Exposure to Endosulfan in Rats: Molecular Explanation for Sex-Dependent Effects.
Tarazona S, Bernabeu E, Carmona H, Gómez-Giménez B, García-Planells J, Leonards PEG, Jung S, Conesa A, Felipo V, Llansola M. Tarazona S, et al. ACS Chem Neurosci. 2019 Oct 16;10(10):4264-4279. doi: 10.1021/acschemneuro.9b00304. Epub 2019 Sep 10. ACS Chem Neurosci. 2019. PMID: 31464424
Identification and visualization of differential isoform expression in RNA-seq time series.
Nueda MJ, Martorell-Marugan J, Martí C, Tarazona S, Conesa A. Nueda MJ, et al. Among authors: tarazona s. Bioinformatics. 2018 Feb 1;34(3):524-526. doi: 10.1093/bioinformatics/btx578. Bioinformatics. 2018. PMID: 28968682 Free PMC article.
Tumor microenvironment-targeted poly-L-glutamic acid-based combination conjugate for enhanced triple negative breast cancer treatment.
Arroyo-Crespo JJ, Armiñán A, Charbonnier D, Balzano-Nogueira L, Huertas-López F, Martí C, Tarazona S, Forteza J, Conesa A, Vicent MJ. Arroyo-Crespo JJ, et al. Among authors: tarazona s. Biomaterials. 2018 Dec;186:8-21. doi: 10.1016/j.biomaterials.2018.09.023. Epub 2018 Sep 18. Biomaterials. 2018. PMID: 30278346 Free article.
Evidence of the Red-Queen Hypothesis from Accelerated Rates of Evolution of Genes Involved in Biotic Interactions in Pneumocystis.
Delaye L, Ruiz-Ruiz S, Calderon E, Tarazona S, Conesa A, Moya A. Delaye L, et al. Among authors: tarazona s. Genome Biol Evol. 2018 Jun 1;10(6):1596-1606. doi: 10.1093/gbe/evy116. Genome Biol Evol. 2018. PMID: 29893833 Free PMC article.
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