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SQANTI: extensive characterization of long-read transcript sequences for quality control in full-length transcriptome identification and quantification.
Tardaguila M, de la Fuente L, Marti C, Pereira C, Pardo-Palacios FJ, Del Risco H, Ferrell M, Mellado M, Macchietto M, Verheggen K, Edelmann M, Ezkurdia I, Vazquez J, Tress M, Mortazavi A, Martens L, Rodriguez-Navarro S, Moreno-Manzano V, Conesa A. Tardaguila M, et al. Genome Res. 2018 Feb 9;28(3):396-411. doi: 10.1101/gr.222976.117. Online ahead of print. Genome Res. 2018. PMID: 29440222 Free PMC article.
Corrigendum: SQANTI: extensive characterization of long-read transcript sequences for quality control in full-length transcriptome identification and quantification.
Tardaguila M, de la Fuente L, Marti C, Pereira C, Pardo-Palacios FJ, Del Risco H, Ferrell M, Mellado M, Macchietto M, Verheggen K, Edelmann M, Ezkurdia I, Vazquez J, Tress M, Mortazavi A, Martens L, Rodriguez-Navarro S, Moreno-Manzano V, Conesa A. Tardaguila M, et al. Genome Res. 2018 Jul;28(7):1096. doi: 10.1101/gr.239137.118. Genome Res. 2018. PMID: 29967126 Free PMC article. No abstract available.
tappAS: a comprehensive computational framework for the analysis of the functional impact of differential splicing.
de la Fuente L, Arzalluz-Luque Á, Tardáguila M, Del Risco H, Martí C, Tarazona S, Salguero P, Scott R, Lerma A, Alastrue-Agudo A, Bonilla P, Newman JRB, Kosugi S, McIntyre LM, Moreno-Manzano V, Conesa A. de la Fuente L, et al. Among authors: tardaguila m. Genome Biol. 2020 May 18;21(1):119. doi: 10.1186/s13059-020-02028-w. Genome Biol. 2020. PMID: 32423416 Free PMC article.
Notch-regulated miR-223 targets the aryl hydrocarbon receptor pathway and increases cytokine production in macrophages from rheumatoid arthritis patients.
Ogando J, Tardáguila M, Díaz-Alderete A, Usategui A, Miranda-Ramos V, Martínez-Herrera DJ, de la Fuente L, García-León MJ, Moreno MC, Escudero S, Cañete JD, Toribio ML, Cases I, Pascual-Montano A, Pablos JL, Mañes S. Ogando J, et al. Among authors: tardaguila m. Sci Rep. 2016 Feb 3;6:20223. doi: 10.1038/srep20223. Sci Rep. 2016. PMID: 26838552 Free PMC article.
CX3CL1 promotes breast cancer via transactivation of the EGF pathway.
Tardáguila M, Mira E, García-Cabezas MA, Feijoo AM, Quintela-Fandino M, Azcoitia I, Lira SA, Mañes S. Tardáguila M, et al. Cancer Res. 2013 Jul 15;73(14):4461-73. doi: 10.1158/0008-5472.CAN-12-3828. Epub 2013 May 29. Cancer Res. 2013. PMID: 23720051 Free PMC article.
SOD3 improves the tumor response to chemotherapy by stabilizing endothelial HIF-2α.
Mira E, Carmona-Rodríguez L, Pérez-Villamil B, Casas J, Fernández-Aceñero MJ, Martínez-Rey D, Martín-González P, Heras-Murillo I, Paz-Cabezas M, Tardáguila M, Oury TD, Martín-Puig S, Lacalle RA, Fabriás G, Díaz-Rubio E, Mañes S. Mira E, et al. Among authors: tardaguila m. Nat Commun. 2018 Feb 8;9(1):575. doi: 10.1038/s41467-018-03079-1. Nat Commun. 2018. PMID: 29422508 Free PMC article.
Transcriptome-wide association study in UK Biobank Europeans identifies associations with blood cell traits.
Rowland B, Venkatesh S, Tardaguila M, Wen J, Rosen JD, Tapia AL, Sun Q, Graff M, Vuckovic D, Lettre G, Sankaran VG, Voloudakis G, Roussos P, Huffman JE, Reiner AP, Soranzo N, Raffield LM, Li Y. Rowland B, et al. Among authors: tardaguila m. Hum Mol Genet. 2022 Jul 21;31(14):2333-2347. doi: 10.1093/hmg/ddac011. Hum Mol Genet. 2022. PMID: 35138379 Free PMC article.
23 results