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NCBI reference sequences (RefSeq): a curated non-redundant sequence database of genomes, transcripts and proteins.
Pruitt KD, Tatusova T, Maglott DR. Pruitt KD, et al. Among authors: tatusova t. Nucleic Acids Res. 2007 Jan;35(Database issue):D61-5. doi: 10.1093/nar/gkl842. Epub 2006 Nov 27. Nucleic Acids Res. 2007. PMID: 17130148 Free PMC article.
Towards BioDBcore: a community-defined information specification for biological databases.
Gaudet P, Bairoch A, Field D, Sansone SA, Taylor C, Attwood TK, Bateman A, Blake JA, Bult CJ, Cherry JM, Chisholm RL, Cochrane G, Cook CE, Eppig JT, Galperin MY, Gentleman R, Goble CA, Gojobori T, Hancock JM, Howe DG, Imanishi T, Kelso J, Landsman D, Lewis SE, Mizrachi IK, Orchard S, Ouellette BF, Ranganathan S, Richardson L, Rocca-Serra P, Schofield PN, Smedley D, Southan C, Tan TW, Tatusova T, Whetzel PL, White O, Yamasaki C; BioDBCore Working Group. Gaudet P, et al. Among authors: tatusova t. Nucleic Acids Res. 2011 Jan;39(Database issue):D7-10. doi: 10.1093/nar/gkq1173. Epub 2010 Nov 18. Nucleic Acids Res. 2011. PMID: 21097465 Free PMC article.
Update on Genomic Databases and Resources at the National Center for Biotechnology Information.
Tatusova T. Tatusova T. Methods Mol Biol. 2016;1415:3-30. doi: 10.1007/978-1-4939-3572-7_1. Methods Mol Biol. 2016. PMID: 27115625
Improvements to pairwise sequence comparison (PASC): a genome-based web tool for virus classification.
Bao Y, Chetvernin V, Tatusova T. Bao Y, et al. Among authors: tatusova t. Arch Virol. 2014 Dec;159(12):3293-304. doi: 10.1007/s00705-014-2197-x. Epub 2014 Aug 14. Arch Virol. 2014. PMID: 25119676 Free PMC article.
PAirwise Sequence Comparison (PASC) and its application in the classification of filoviruses.
Bao Y, Chetvernin V, Tatusova T. Bao Y, et al. Among authors: tatusova t. Viruses. 2012 Aug;4(8):1318-27. doi: 10.3390/v4081318. Epub 2012 Aug 20. Viruses. 2012. PMID: 23012628 Free PMC article.
[No authors listed] [No authors listed] PMID: 22378983
Towards Viral Genome Annotation Standards, Report from the 2010 NCBI Annotation Workshop.
Brister JR, Bao Y, Kuiken C, Lefkowitz EJ, Le Mercier P, Leplae R, Madupu R, Scheuermann RH, Schobel S, Seto D, Shrivastava S, Sterk P, Zeng Q, Klimke W, Tatusova T. Brister JR, et al. Among authors: tatusova t. Viruses. 2010 Oct;2(10):2258-68. doi: 10.3390/v2102258. Epub 2010 Oct 13. Viruses. 2010. PMID: 21994619 Free PMC article.
Mining the NCBI Influenza Sequence Database: adaptive grouping of BLAST results using precalculated neighbor indexing.
Zaslavsky L, Tatusova T. Zaslavsky L, et al. Among authors: tatusova t. PLoS Curr. 2009 Oct 30;1:RRN1124. doi: 10.1371/currents.RRN1124. PLoS Curr. 2009. PMID: 20029662 Free PMC article.
Splign: algorithms for computing spliced alignments with identification of paralogs.
Kapustin Y, Souvorov A, Tatusova T, Lipman D. Kapustin Y, et al. Among authors: tatusova t. Biol Direct. 2008 May 21;3:20. doi: 10.1186/1745-6150-3-20. Biol Direct. 2008. PMID: 18495041 Free PMC article.
A collection of plant-specific genomic data and resources at NCBI.
Tatusova T, Smith-White B, Ostell J. Tatusova T, et al. Methods Mol Biol. 2007;406:61-87. doi: 10.1007/978-1-59745-535-0_3. Methods Mol Biol. 2007. PMID: 18287688
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