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Reconstructing the metabolic network of a bacterium from its genome.
Francke C, Siezen RJ, Teusink B. Francke C, et al. Among authors: teusink b. Trends Microbiol. 2005 Nov;13(11):550-8. doi: 10.1016/j.tim.2005.09.001. Epub 2005 Sep 19. Trends Microbiol. 2005. PMID: 16169729 Review.
Genome data mining of lactic acid bacteria: the impact of bioinformatics.
Siezen RJ, van Enckevort FH, Kleerebezem M, Teusink B. Siezen RJ, et al. Among authors: teusink b. Curr Opin Biotechnol. 2004 Apr;15(2):105-15. doi: 10.1016/j.copbio.2004.02.002. Curr Opin Biotechnol. 2004. PMID: 15081047 Review.
Functional ingredient production: application of global metabolic models.
Smid EJ, Molenaar D, Hugenholtz J, de Vos WM, Teusink B. Smid EJ, et al. Among authors: teusink b. Curr Opin Biotechnol. 2005 Apr;16(2):190-7. doi: 10.1016/j.copbio.2005.03.001. Curr Opin Biotechnol. 2005. PMID: 15831386 Review.
Metabolic models for rational improvement of lactic acid bacteria as cell factories.
Smid EJ, van Enckevort FJ, Wegkamp A, Boekhorst J, Molenaar D, Hugenholtz J, Siezen RJ, Teusink B. Smid EJ, et al. Among authors: teusink b. J Appl Microbiol. 2005;98(6):1326-31. doi: 10.1111/j.1365-2672.2005.02652.x. J Appl Microbiol. 2005. PMID: 15916646 Review. No abstract available.
In silico reconstruction of the metabolic pathways of Lactobacillus plantarum: comparing predictions of nutrient requirements with those from growth experiments.
Teusink B, van Enckevort FH, Francke C, Wiersma A, Wegkamp A, Smid EJ, Siezen RJ. Teusink B, et al. Appl Environ Microbiol. 2005 Nov;71(11):7253-62. doi: 10.1128/AEM.71.11.7253-7262.2005. Appl Environ Microbiol. 2005. PMID: 16269766 Free PMC article.
Modelling strategies for the industrial exploitation of lactic acid bacteria.
Teusink B, Smid EJ. Teusink B, et al. Nat Rev Microbiol. 2006 Jan;4(1):46-56. doi: 10.1038/nrmicro1319. Nat Rev Microbiol. 2006. PMID: 16357860 Review.
Accelerating the reconstruction of genome-scale metabolic networks.
Notebaart RA, van Enckevort FH, Francke C, Siezen RJ, Teusink B. Notebaart RA, et al. Among authors: teusink b. BMC Bioinformatics. 2006 Jun 13;7:296. doi: 10.1186/1471-2105-7-296. BMC Bioinformatics. 2006. PMID: 16772023 Free PMC article.
Analysis of growth of Lactobacillus plantarum WCFS1 on a complex medium using a genome-scale metabolic model.
Teusink B, Wiersma A, Molenaar D, Francke C, de Vos WM, Siezen RJ, Smid EJ. Teusink B, et al. J Biol Chem. 2006 Dec 29;281(52):40041-8. doi: 10.1074/jbc.M606263200. Epub 2006 Oct 24. J Biol Chem. 2006. PMID: 17062565
Co-regulation of metabolic genes is better explained by flux coupling than by network distance.
Notebaart RA, Teusink B, Siezen RJ, Papp B. Notebaart RA, et al. Among authors: teusink b. PLoS Comput Biol. 2008 Jan;4(1):e26. doi: 10.1371/journal.pcbi.0040026. PLoS Comput Biol. 2008. PMID: 18225949 Free PMC article.
Genome-scale model of Streptococcus thermophilus LMG18311 for metabolic comparison of lactic acid bacteria.
Pastink MI, Teusink B, Hols P, Visser S, de Vos WM, Hugenholtz J. Pastink MI, et al. Among authors: teusink b. Appl Environ Microbiol. 2009 Jun;75(11):3627-33. doi: 10.1128/AEM.00138-09. Epub 2009 Apr 3. Appl Environ Microbiol. 2009. PMID: 19346354 Free PMC article.
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